RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 TMEM253P0C7T8 217 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 CHRNA3P32297 505 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 ZNF211Q13398 564 aaPredicted RBP10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 CAPSQ13938 189 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 ANKRD20A3Q5VUR7 823 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 KLC3Q6P597 504 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 SDCCAG8Q86SQ7 713 aaPredicted RBP10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 PPP1R13LQ8WUF5 828 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 HDAC11Q96DB2 347 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 CFAP36Q96G28 342 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 GTF3C4Q9UKN8 822 aa10.71□□□□□ -0.69
SRGAP2-217ENST00000624873 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 F5H5T6 163 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 PI4K2BG5E9Z4 385 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 PEX10O60683 326 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 RNF40O75150 1001 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 SMPD1P17405 629 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 MLH1P40692 756 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 C2orf54Q08AI8 447 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 MCUQ8NE86 351 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 SENP8Q96LD8 212 aa10.71□□□□□ -0.7
SRGAP2-217ENST00000624873 C3orf70A6NLC5 250 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 MTSS1O43312 755 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 EIF3EP60228 445 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 GTF2BQ00403 316 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 MTA1Q13330 715 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 CUL1Q13616 776 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 PABPC1LQ4VXU2 614 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 GLE1Q53GS7 698 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 KCNK18Q7Z418 384 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 SAPCD2Q86UD0 394 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 ZC3H18Q86VM9 953 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 TRIM59Q8IWR1 403 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 DEPDC1BQ8WUY9 529 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 SCG3Q8WXD2 468 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 TSPAN18Q96SJ8 248 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 IGFLR1Q9H665 355 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 CFAP69A5D8W1 941 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 RTN3O95197 1032 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 MT-ND3P03897 115 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 RPL9P32969 192 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 MAP3K7CLP57077 242 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 PDK1Q15118 436 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 LRRC8DQ7L1W4 858 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 RILPQ96NA2 401 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■■■□ 21.1
SRGAP2-217ENST00000624873 TMEM117Q9H0C3 514 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 SLC10A3P09131 477 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 KCNA3P22001 575 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 EPHB2P29323 1055 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 ETFBP38117 255 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 SMARCD1Q96GM5 515 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 ADH1AP07327 375 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 KCNA2P16389 499 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 FXR1P51114 621 aaKnown RBP eCLIP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 LAMB3Q13751 1172 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 TAF1BQ53T94 588 aaPredicted RBP10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 GJB7Q6PEY0 223 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 ANO5Q75V66 913 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 OR6P1Q8NGX9 317 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 MGARPQ8TDB4 240 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 CHP1Q99653 195 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 FAM105AQ9NUU6 356 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 TMEM51Q9NW97 253 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 INTUQ9ULD6 942 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 PCDHA2Q9Y5H9 948 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
SRGAP2-217ENST00000624873 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 SLC12A8A0AV02 714 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 DARSP14868 501 aaKnown RBP10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 ORC1Q13415 861 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 ANKS3Q6ZW76 656 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 SLC24A5Q71RS6 500 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 SLC51AQ86UW1 340 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 TRIM42Q8IWZ5 723 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 C7orf61Q8IZ16 206 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 TMEM161BQ8NDZ6 487 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 KRT37O76014 449 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 YWHAQP27348 245 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 NDST1P52848 882 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 EFEMP1Q12805 493 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 ARHGEF7Q14155 803 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 MAP7Q14244 749 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 USP41Q3LFD5 358 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 HERC6Q8IVU3 1022 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 LRRC43Q8N309 656 aa10.69□□□□□ -0.7
SRGAP2-217ENST00000624873 WHAMMQ8TF30 809 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms