RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
ATRX-214ENST00000624166 MRGBPQ9NV56 204 aa12.37□□□□□ -0.43
ATRX-214ENST00000624166 DNAJC6O75061 913 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 NPTXRO95502 500 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 APRTP07741 180 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 RSBN1LQ6PCB5 846 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 DBNDD1Q9H9R9 158 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 ERVK-5Q9HDB9 667 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 PCDHA10Q9Y5I2 948 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 DGAT1O75907 488 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 GCLCP48506 637 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 VCPP55072 806 aaKnown RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 EME1Q96AY2 570 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 ZNF317Q96PQ6 595 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 ASTN1O14525 1302 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 CASZ1Q86V15 1759 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 INO80B-WBP1J3KQ70 363 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 KCNN4O15554 427 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 CYP1A2P05177 515 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 BGNP21810 368 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 SDC4P31431 198 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 AQP5P55064 265 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 OCA2Q04671 838 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 COG2Q14746 738 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 LMBRD2Q68DH5 695 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 EPS8L1Q8TE68 723 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 CATSPER2Q96P56 530 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 INO80BQ9C086 356 aaPredicted RBP12.36□□□□□ -0.43
ATRX-214ENST00000624166 C17orf75Q9HAS0 396 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 COMMD3-BMI1R4GMX3 469 aa12.36□□□□□ -0.43
ATRX-214ENST00000624166 APOL1O14791 398 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 FESP07332 822 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 TAC1P20366 129 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 DUOXA2Q1HG44 320 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 SLC44A4Q53GD3 710 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 ECHDC2Q86YB7 292 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 VCPIP1Q96JH7 1222 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 CCT7Q99832 543 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 ANKEF1Q9NU02 776 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 RNF103-CHMP3A0A140T963 221 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 ADRA1DP25100 572 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 NLRP11P59045 1033 aaKnown RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 NOP9Q86U38 636 aaKnown RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 THNSL1Q8IYQ7 743 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 APOPT1Q96IL0 206 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 RPF1Q9H9Y2 349 aaKnown RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 TBX20Q9UMR3 447 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 A8MUI8 341 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 H0YGN5 161 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 PIK3R2O00459 728 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 MARCKSL1P49006 195 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 FAM102AQ5T9C2 384 aaPredicted RBP12.35□□□□□ -0.43
ATRX-214ENST00000624166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATRX-214ENST00000624166 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 RHBDL2Q9NX52 303 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 NFS1Q9Y697 457 aa12.35□□□□□ -0.43
ATRX-214ENST00000624166 LOC100653049A0A140TA62 436 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATRX-214ENST00000624166 KRT34O76011 436 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 ASNSP08243 561 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 ATP6V1B1P15313 513 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
ATRX-214ENST00000624166 PSMD7P51665 324 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 NCOA4Q13772 614 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 EFTUD2Q15029 972 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATRX-214ENST00000624166 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 JDP2Q8WYK2 163 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 NMD3Q96D46 503 aaKnown RBP12.34□□□□□ -0.43
ATRX-214ENST00000624166 GORASP1Q9BQQ3 440 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 PI4K2AQ9BTU6 479 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 KCNK4Q9NYG8 393 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 BFARQ9NZS9 450 aa12.34□□□□□ -0.43
ATRX-214ENST00000624166 FRMPD4Q14CM0 1322 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms