RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 ZCWPW1Q9H0M4 648 aa13.71□□□□□ -0.21
PSME3-217ENST00000622892 TMEM8AQ9HCN3 771 aa13.71□□□□□ -0.21
PSME3-217ENST00000622892 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
PSME3-217ENST00000622892 HEY2Q9UBP5 337 aa13.71□□□□□ -0.21
PSME3-217ENST00000622892 UMODL1Q5DID0 1318 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 KIF3CO14782 793 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.22
PSME3-217ENST00000622892 GPC3P51654 580 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 GTF2BQ00403 316 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 RCN2Q14257 317 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 DPY19L2Q6NUT2 758 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 LRRC6Q86X45 466 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 RHOT1Q8IXI2 618 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.22
PSME3-217ENST00000622892 NVLO15381 856 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 ZBED4O75132 1171 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 PTPRAP18433 802 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 SNX30Q5VWJ9 437 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 APOBEC3FQ8IUX4 373 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 BBOF1Q8ND07 529 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 NRG4Q8WWG1 115 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 SLC17A7Q9P2U7 560 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 DENND3A2RUS2 1198 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 PRPF4O43172 522 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSME3-217ENST00000622892 YWHABP31946 246 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 CPA2P48052 419 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 SP4Q02446 784 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 TFDP1Q14186 410 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 XKR9Q5GH70 373 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 MFSD7Q6UXD7 560 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 ENDOVQ8N8Q3 282 aaKnown RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 RBBP8NLQ8NC74 664 aaPredicted RBP13.7□□□□□ -0.22
PSME3-217ENST00000622892 PTPRN2Q92932 1015 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 FAM213AQ9BRX8 229 aa13.7□□□□□ -0.22
PSME3-217ENST00000622892 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 CAPN9O14815 690 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 TYROBPO43914 113 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 NEFHP12036 1026 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SLC1A1P43005 524 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 PAPOLAP51003 745 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 MRPS35P82673 323 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 NR1H3Q13133 447 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 VGLL4Q14135 290 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 WASHC2DQ5SRD0 308 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SYCP2LQ5T4T6 812 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 TCP10LQ8TDR4 215 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 C2CD2Q9Y426 696 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 TBC1D12O60347 775 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 MUTP22033 750 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 DYNLT1P63172 113 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 TXNRD3NBQ6F5E7 133 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 TTC7BQ86TV6 843 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 C12orf56Q8IXR9 622 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 RIBC1Q8N443 379 aaPredicted RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SGK1O00141 431 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 GYG2O15488 501 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 LIASO43766 372 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 SERPINB3P29508 390 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
PSME3-217ENST00000622892 POLE2P56282 527 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 SLC45A4Q5BKX6 768 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 NLRX1Q86UT6 975 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 VPS52Q8N1B4 723 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 COL20A1Q9P218 1284 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
PSME3-217ENST00000622892 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
PSME3-217ENST00000622892 LGR5O75473 907 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms