RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PPP1R15BQ5SWA1 713 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 CYP4X1Q8N118 509 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 RBM41Q96IZ5 413 aaKnown RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 CYTH4Q9UIA0 394 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 H0YHG0 523 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.39
TP53-227ENST00000622645 TJP3O95049 919 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 SLC25A27O95847 323 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 TNNC2P02585 160 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 RFC1P35251 1148 aaPredicted RBP12.65□□□□□ -0.39
TP53-227ENST00000622645 SURF1Q15526 300 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 PTPN20Q4JDL3 420 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.39
TP53-227ENST00000622645 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 HIBCHQ6NVY1 386 aaPredicted RBP12.65□□□□□ -0.39
TP53-227ENST00000622645 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 ERO1BQ86YB8 467 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 MMP19Q99542 508 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 CDT1Q9H211 546 aa12.65□□□□□ -0.39
TP53-227ENST00000622645 TMEM120BA0PK00 339 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 GPR25O00155 361 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 B4GALT4O60513 344 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 ATP2C2O75185 946 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 FSBPO95073 299 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 ADCY1Q08828 1119 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 TTLL12Q14166 644 aaPredicted RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 SMTNL2Q2TAL5 461 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 KCNT1Q5JUK3 1230 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 HP1BP3Q5SSJ5 553 aaPredicted RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 ANKRD36BP1Q96IX9 119 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 RBM15Q96T37 977 aaKnown RBP eCLIP12.64□□□□□ -0.39
TP53-227ENST00000622645 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 ADARB2Q9NS39 739 aaKnown RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 SAE1Q9UBE0 346 aaPredicted RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 SIX4Q9UIU6 781 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 AGTPBP1Q9UPW5 1226 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 PPME1Q9Y570 386 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 CEP83Q9Y592 693 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 A0A0G2JMZ2 1700 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 DNAJC25-GNG10A0A024R161 153 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 DNM1LO00429 736 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 NFICP08651 508 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 CDH5P33151 784 aaPredicted RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 ARSEP51690 589 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 PIGHQ14442 188 aaPredicted RBP12.64□□□□□ -0.39
TP53-227ENST00000622645 LRRC38Q5VT99 294 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 VSTM1Q6UX27 236 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 BBOF1Q8ND07 529 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 SMARCAD1Q9H4L7 1026 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
TP53-227ENST00000622645 hCG_1818297A0A087WSY0 165 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 CDKN2BP42772 138 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
TP53-227ENST00000622645 MPP2Q14168 576 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 TFDP1Q14186 410 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 KIAA0319LQ8IZA0 1049 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ARFGAP1Q8N6T3 406 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 EMC1Q8N766 993 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ANKRD42Q8N9B4 389 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 C1orf127Q8N9H9 656 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 TWNKQ96RR1 684 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
TP53-227ENST00000622645 SDCBP2Q9H190 292 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
TP53-227ENST00000622645 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 CXCL11O14625 94 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 IFNB1P01574 187 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 KRT3P12035 628 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 PSMA2P25787 234 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 MAGEA4P43358 317 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 DYNLT1P63172 113 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 LMNB2Q03252 620 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 GPS1Q13098 491 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 TAX1BP1Q86VP1 789 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 ALLCQ8N6M5 410 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 DYDC1Q8WWB3 177 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 IFT122Q9HBG6 1241 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
TP53-227ENST00000622645 SPDYE5A6NIY4 337 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms