RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 KIF5AQ12840 1032 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 SGO2Q562F6 1265 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 WSCD1Q658N2 575 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 H2AFVQ71UI9 128 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 ACOT1Q86TX2 421 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 UNC93AQ86WB7 457 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 BADQ92934 168 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 DPEP3Q9H4B8 488 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 INTUQ9ULD6 942 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 PCDHGC3Q9UN70 934 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 PRG3Q9Y2Y8 225 aaPredicted RBP11.34□□□□□ -0.59
CPNE3-212ENST00000621783 NCANO14594 1321 aa11.34□□□□□ -0.59
CPNE3-212ENST00000621783 M0QZQ0 153 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 O00370 1275 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 GABRDO14764 452 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 RTN2O75298 545 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 DGKIO75912 1065 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 MICAL2O94851 1124 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 CYP11A1P05108 521 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 GZMAP12544 262 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 UNGP13051 313 aaPredicted RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 GNL1P36915 607 aaPredicted RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 SLC11A1P49279 550 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 CENPCQ03188 943 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 PTPN14Q15678 1187 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TMCO2Q7Z6W1 182 aaPredicted RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM86AQ8N2M4 240 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 SPATA18Q8TC71 538 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TOP1MTQ969P6 601 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 CYFIP2Q96F07 1278 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 SUSD3Q96L08 255 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 HEXIM2Q96MH2 286 aaKnown RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM175Q9BSA9 504 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 MARCH5Q9NX47 278 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 GUCA1BQ9UMX6 200 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
CPNE3-212ENST00000621783 TIMM13Q9Y5L4 95 aaPredicted RBP11.33□□□□□ -0.6
CPNE3-212ENST00000621783 MACROD2A1Z1Q3 448 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 M0QYV0 167 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 NRP1O14786 923 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 KIF5CO60282 957 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 PDGFRBP09619 1106 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 CCDC130P13994 396 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 SYN1P17600 705 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 ABCB4P21439 1286 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 LMO2P25791 158 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 CDH5P33151 784 aaPredicted RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 EPHB4P54760 987 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 GOLGA7BQ2TAP0 167 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 C16orf59Q7L2K0 433 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 OTOP2Q7RTS6 562 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 CPA5Q8WXQ8 436 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 DNAI2Q9GZS0 605 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 DDX43Q9NXZ2 648 aaKnown RBP11.32□□□□□ -0.6
CPNE3-212ENST00000621783 SALL4Q9UJQ4 1053 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 DSEQ9UL01 958 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 KIAA1257Q9ULG3 409 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 CEP83Q9Y592 693 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 PAXBP1Q9Y5B6 917 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 DUSP10Q9Y6W6 482 aa11.32□□□□□ -0.6
CPNE3-212ENST00000621783 KIAA1671Q9BY89 1806 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ARHGEF37A1IGU5 675 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 KIF2AO00139 706 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ATP2C2O75185 946 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 MOCS3O95396 460 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 GALTP07902 379 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 TNNT1P13805 278 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 TYMPP19971 482 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ACAT1P24752 427 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms