RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 OR1G1P47890 313 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 BCAR1P56945 870 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
CBWD3-216ENST00000621396 NOMO3P69849 1222 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 TUSC3Q13454 348 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 PPP1R26Q5T8A7 1209 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-216ENST00000621396 ACAD10Q6JQN1 1059 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 CD300LGQ6UXG3 332 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 DSTYKQ6XUX3 929 aa16.92■□□□□ 0.3
CBWD3-216ENST00000621396 ANKRD62A6NC57 917 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 URI1O94763 535 aaPredicted RBP16.91■□□□□ 0.3
CBWD3-216ENST00000621396 FTCDO95954 541 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 NSFP46459 744 aaKnown RBP16.91■□□□□ 0.3
CBWD3-216ENST00000621396 C10orf76Q5T2E6 689 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 MMS22LQ6ZRQ5 1243 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 OTOP2Q7RTS6 562 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 MYH10P35580 1976 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
CBWD3-216ENST00000621396 GZMAP12544 262 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 CCDC130P13994 396 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 RRM1P23921 792 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 ZNF677Q86XU0 584 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 ZNF653Q96CK0 615 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 STXBP5LQ9Y2K9 1186 aa16.91■□□□□ 0.3
CBWD3-216ENST00000621396 TDRD15B5MCY1 1934 aaKnown RBP16.91■□□□□ 0.3
CBWD3-216ENST00000621396 TULP2O00295 520 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 SRGAP2O75044 1071 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TIMP1P01033 207 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 CYP4A22Q5TCH4 519 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 KIAA0319Q5VV43 1072 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 CRIPAKQ8N1N5 446 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 APBB2Q92870 758 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 NOX5Q96PH1 765 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TSPAN16Q9UKR8 245 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TTC3P53804 2025 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TBKBP1A7MCY6 615 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 M0QYV0 167 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 MICAL2O94851 1124 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 TMEM253P0C7T8 217 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 DEFB103AP81534 67 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 IKBKEQ14164 716 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 CPNE8Q86YQ8 564 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 B3GALT6Q96L58 329 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
CBWD3-216ENST00000621396 GRID2IPA4D2P6 1211 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 O00370 1275 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 PAEPP09466 180 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 SYN1P17600 705 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 RABGGTBP53611 331 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 GPC5P78333 572 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 CENPCQ03188 943 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 SGO2Q562F6 1265 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 MCOLN2Q8IZK6 566 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 ADAM22Q9P0K1 906 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 CNOT8Q9UFF9 292 aaKnown RBP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 CLDN5O00501 218 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 ADORA2BP29275 332 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 CXCR5P32302 372 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 RPL9P32969 192 aaKnown RBP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM173Q86WV6 379 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 FAXDC2Q96IV6 333 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 ST7Q9NRC1 585 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
CBWD3-216ENST00000621396 TANC1Q9C0D5 1861 aa16.89■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM110-MUSTN1A8MSY1 372 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TACC1O75410 805 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 DSC1Q08554 894 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 DAB2IPQ5VWQ8 1189 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-216ENST00000621396 MON1BQ7L1V2 547 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 RFFLQ8WZ73 363 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 NUP85Q9BW27 656 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 CTAGE9A4FU28 777 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-216ENST00000621396 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-216ENST00000621396 VDRP11473 427 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 RGS7P49802 495 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 GOLGA7BQ2TAP0 167 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 UBE2Q1Q7Z7E8 422 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 DAAM2Q86T65 1068 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TTC30AQ86WT1 665 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TRIM58Q8NG06 486 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 SLC2A14Q8TDB8 520 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
CBWD3-216ENST00000621396 TKTP29401 623 aaKnown RBP16.87■□□□□ 0.29
CBWD3-216ENST00000621396 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 CNKSR3Q6P9H4 555 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms