RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ADARP55265 1226 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 KRT17Q04695 432 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ACCSLQ4AC99 568 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PRAMEF18Q5VWM3 479 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 TTC27Q6P3X3 843 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 FKBP9P1Q75LS8 142 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 GPIHBP1Q8IV16 184 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HDDC3Q8N4P3 179 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 URGCPQ8TCY9 931 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 NUP85Q9BW27 656 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 EFCAB1Q9HAE3 211 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC59Q9P031 241 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 STK39Q9UEW8 545 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 EDARQ9UNE0 448 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 IQSEC2Q5JU85 1478 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 H3BMM5 538 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 APOL1O14791 398 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF862O60290 1169 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 FKTNO75072 461 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PSAPP07602 524 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HIST1H2AGP0C0S8 130 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HOXB6P17509 224 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HIST1H2ADP20671 130 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PAX3P23760 479 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 TKTP29401 623 aaKnown RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SCARF1Q14162 830 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 NCAPHQ15003 741 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 RCN1Q15293 331 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 LPCAT2Q7L5N7 544 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 RBBP8NLQ8NC74 664 aaPredicted RBP7.47□□□□□ -1.21
COLCA1-205ENST00000620864 VPS33AQ96AX1 596 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HIST1H2AHQ96KK5 128 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 FAM167AQ96KS9 214 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 HIST1H2AJQ99878 128 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 C17orf80Q9BSJ5 609 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 H2AFJQ9BTM1 129 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 GGA3Q9NZ52 723 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SNX12Q9UMY4 172 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 ADGRG1Q9Y653 693 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 GUCY1B2O75343 617 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SDHBP21912 280 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 RAB2AP61019 212 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 CHRNB3Q05901 458 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 DPP10Q8N608 796 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 MCPH1Q8NEM0 835 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PI4K2BQ8TCG2 481 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 RMND5AQ9H871 391 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 WDR35Q9P2L0 1181 aa7.47□□□□□ -1.21
COLCA1-205ENST00000620864 PLA2G4BP0C869 781 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 NPEPPSP55786 919 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 BCAR1P56945 870 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 ACTR2P61160 394 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 TFAMQ00059 246 aaKnown RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 TSNQ15631 228 aaKnown RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 PPP1R18Q6NYC8 613 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 PEG10Q86TG7 708 aaKnown RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 CENPSQ8N2Z9 138 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 SLC13A1Q9BZW2 595 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 SAMSN1Q9NSI8 373 aaKnown RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 ZNRF3Q9ULT6 936 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 TPRKBQ9Y3C4 175 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 VWA5AO00534 786 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 AHCYL1O43865 530 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 SNRPAP09012 282 aaKnown RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 RGS4P49798 205 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 GMPSP49915 693 aaPredicted RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 AP3B2Q13367 1082 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 TOP3AQ13472 1001 aaPredicted RBP7.46□□□□□ -1.21
COLCA1-205ENST00000620864 STILQ15468 1287 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 PTGISQ16647 500 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 ANO4Q32M45 955 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 CCNJLQ8IV13 435 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 ARL8AQ96BM9 186 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 KIFC1Q9BW19 673 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 MANSC1Q9H8J5 431 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 SLC9A2Q9UBY0 812 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 ING4Q9UNL4 249 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 RABL2BQ9UNT1 228 aa7.46□□□□□ -1.21
COLCA1-205ENST00000620864 CIAO1O76071 339 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 IRAK1P51617 712 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 RPL19P84098 196 aaKnown RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 RGS21Q2M5E4 152 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 ANGEL2Q5VTE6 544 aaKnown RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 IL17REQ8NFR9 667 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 RNFT2Q96EX2 444 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 MAGEB18Q96M61 343 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 SPATA16Q9BXB7 569 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 RNPEPQ9H4A4 650 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 TMCC3Q9ULS5 477 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 WBP11Q9Y2W2 641 aaKnown RBP7.46□□□□□ -1.22
COLCA1-205ENST00000620864 TM9SF1O15321 606 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 CNTFP26441 200 aa7.46□□□□□ -1.22
COLCA1-205ENST00000620864 CENPCQ03188 943 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms