RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ATP8B4Q8TF62 1192 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SEC14L1Q92503 715 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MCUR1Q96AQ8 359 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 RPS6KC1Q96S38 1066 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SMC6Q96SB8 1091 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 CYP26B1Q9NR63 512 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 EXOC1LA0A1B0GW35 172 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 DGAT1O75907 488 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ARIH2O95376 493 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 PLS3P13797 630 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MFAP3P55082 362 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SESN3P58005 492 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 KYNUQ16719 465 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 HSDL1Q3SXM5 330 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 BZW1Q7L1Q6 419 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 HAUS6Q7Z4H7 955 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM228AQ86W67 206 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 AGGF1Q8N302 714 aaeCLIP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 TEX9Q8N6V9 391 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MCPH1Q8NEM0 835 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ALG3Q92685 438 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 BICD1Q96G01 975 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 TSC22D3Q99576 134 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 KIFC3Q9BVG8 833 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 IKZF4Q9H2S9 585 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 PCIF1Q9H4Z3 704 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 VPS37BQ9H9H4 285 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ZDHHC18Q9NUE0 388 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 PCYOX1Q9UHG3 505 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 POC1B-GALNT4F8VUJ3 575 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 H0Y3Z8 333 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 CYP2B6P20813 491 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MXI1P50539 228 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 BFSP1Q12934 665 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 SPARCL1Q14515 664 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ANKRD20A2Q5SQ80 823 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 C6orf163Q5TEZ5 329 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ANKRD20A1Q5TYW2 823 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ANKRD20A3Q5VUR7 823 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 AADACL2Q6P093 401 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 PRELID2Q8N945 189 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 TMEM143Q96AN5 459 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ERP27Q96DN0 273 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 NUDCD1Q96RS6 583 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 DDX23Q9BUQ8 820 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 EBF2Q9HAK2 575 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 KIF9Q9HAQ2 790 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 MORF4L1Q9UBU8 362 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
SRGAP3-213ENST00000618999 CLDN3O15551 220 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 PDHA1P08559 390 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CTNNA2P26232 953 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 JAM2P57087 298 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 PLCB3Q01970 1234 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CELF3Q5SZQ8 465 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 EXOC3L1Q86VI1 746 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 DAW1Q8N136 415 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 VPS52Q8N1B4 723 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 MAB21L3Q8N8X9 362 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 KRT35Q92764 455 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 RNF34Q969K3 372 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CFAP57Q96MR6 1250 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ACCSQ96QU6 501 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TMEM109Q9BVC6 243 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CHORDC1Q9UHD1 332 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 BOLA1Q9Y3E2 137 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 EMSYQ7Z589 1322 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 WDR90Q96KV7 1748 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 COL11A1P12107 1806 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 LRRIQ4A6NIV6 560 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 KRT16P08779 473 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 RARAP10276 462 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ADCYAP1R1P41586 468 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 GCLMP48507 274 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 NR1H3Q13133 447 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 STAT4Q14765 748 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TMEM63BQ5T3F8 832 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 SYDE1Q6ZW31 735 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ERICH1Q86X53 443 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 SMC1BQ8NDV3 1235 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 NAF1Q96HR8 494 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ANKRD27Q96NW4 1050 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CCDC134Q9H6E4 229 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TAS2R14Q9NYV8 317 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 USH1CQ9Y6N9 552 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 DENND3A2RUS2 1198 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM47DPA6NHR8 397 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TNPO2O14787 897 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ATMINO43313 823 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms