RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 DNAJC25Q9H1X3 360 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 CYP4F11Q9HBI6 524 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 TMEM8AQ9HCN3 771 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 ABCB6Q9NP58 842 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 TMLHEQ9NVH6 421 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 DDX43Q9NXZ2 648 aaKnown RBP8.85□□□□□ -0.99
NEK3-209ENST00000618856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEK3-209ENST00000618856 CEP72Q9P209 647 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 YIPF1Q9Y548 306 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 ZFP37Q9Y6Q3 630 aaPredicted RBP8.85□□□□□ -0.99
NEK3-209ENST00000618856 CCL16O15467 120 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 MOSPD3O75425 235 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 GABBR2O75899 941 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TRIM49P0CI25 452 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TRIM49CP0CI26 452 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 HAPLN1P10915 354 aaPredicted RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 CPB1P15086 417 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 PTPN2P17706 415 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ATF6P18850 670 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 LMO2P25791 158 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ELF1P32519 619 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ASPAP45381 313 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TUFMP49411 452 aaKnown RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 ARPP19P56211 112 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 MYL7Q01449 175 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TWF1Q12792 350 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TRPC3Q13507 836 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 STIM1Q13586 685 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 CAMK4Q16566 473 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 NFE2Q16621 373 aaPredicted RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 SLC5A9Q2M3M2 681 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 WDR72Q3MJ13 1102 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 SLC39A12Q504Y0 691 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 KRT39Q6A163 491 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ISM2Q6H9L7 571 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TMC8Q8IU68 726 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 DCP1BQ8IZD4 617 aaKnown RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 TTC9BQ8N6N2 239 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 MLKLQ8NB16 471 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ATAD1Q8NBU5 361 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 LEMD2Q8NC56 503 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TAS1R2Q8TE23 839 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 NELFBQ8WX92 580 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 SLC35C1Q96A29 364 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 EEF2KMTQ96G04 330 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 FUBP3Q96I24 572 aaKnown RBP eCLIP8.84□□□□□ -0.99
NEK3-209ENST00000618856 CEP295NLQ96MC4 621 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 MYADMQ96S97 322 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 TSG101Q99816 390 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 MRPL45Q9BRJ2 306 aaKnown RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 BCO2Q9BYV7 579 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 FAM124BQ9H5Z6 455 aaPredicted RBP8.84□□□□□ -0.99
NEK3-209ENST00000618856 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 HCFC1R1Q9NWW0 138 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 CDH9Q9ULB4 789 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 ASB3Q9Y575 518 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 DOCK8Q8NF50 2099 aa8.84□□□□□ -0.99
NEK3-209ENST00000618856 BICDL2A1A5D9 508 aa8.83□□□□□ -1
NEK3-209ENST00000618856 MYBPHLA2RUH7 354 aa8.83□□□□□ -1
NEK3-209ENST00000618856 BIN1O00499 593 aa8.83□□□□□ -1
NEK3-209ENST00000618856 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 PRRG1O14668 218 aa8.83□□□□□ -1
NEK3-209ENST00000618856 DCXO43602 365 aa8.83□□□□□ -1
NEK3-209ENST00000618856 HCRTO43612 131 aa8.83□□□□□ -1
NEK3-209ENST00000618856 STX10O60499 249 aa8.83□□□□□ -1
NEK3-209ENST00000618856 LRRN2O75325 713 aa8.83□□□□□ -1
NEK3-209ENST00000618856 HLA-DRAP01903 254 aa8.83□□□□□ -1
NEK3-209ENST00000618856 LRG1P02750 347 aa8.83□□□□□ -1
NEK3-209ENST00000618856 RHOP08100 348 aa8.83□□□□□ -1
NEK3-209ENST00000618856 EPB41P11171 864 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 LAMP2P13473 410 aa8.83□□□□□ -1
NEK3-209ENST00000618856 KRT13P13646 458 aa8.83□□□□□ -1
NEK3-209ENST00000618856 ALADP13716 330 aa8.83□□□□□ -1
NEK3-209ENST00000618856 FSHRP23945 695 aa8.83□□□□□ -1
NEK3-209ENST00000618856 ACAT1P24752 427 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 PCSK1P29120 753 aa8.83□□□□□ -1
NEK3-209ENST00000618856 SSTR3P32745 418 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 GNL1P36915 607 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 CCR2P41597 374 aa8.83□□□□□ -1
NEK3-209ENST00000618856 MAGEA11P43364 429 aa8.83□□□□□ -1
NEK3-209ENST00000618856 GCLMP48507 274 aa8.83□□□□□ -1
NEK3-209ENST00000618856 NTHL1P78549 312 aa8.83□□□□□ -1
NEK3-209ENST00000618856 TSPY1Q01534 308 aa8.83□□□□□ -1
NEK3-209ENST00000618856 INCA1Q0VD86 236 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PAK1Q13153 545 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PLD1Q13393 1074 aa8.83□□□□□ -1
NEK3-209ENST00000618856 BIRC3Q13489 604 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PTPN21Q16825 1174 aa8.83□□□□□ -1
NEK3-209ENST00000618856 ZNF699Q32M78 642 aa8.83□□□□□ -1
NEK3-209ENST00000618856 CBWD6Q4V339 395 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PABPC1LQ4VXU2 614 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 CT47A1Q5JQC4 288 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 CBWD3Q5JTY5 395 aa8.83□□□□□ -1
NEK3-209ENST00000618856 CBWD5Q5RIA9 395 aa8.83□□□□□ -1
NEK3-209ENST00000618856 TRIM59Q8IWR1 403 aa8.83□□□□□ -1
NEK3-209ENST00000618856 TDRD5Q8NAT2 981 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 ITFG1Q8TB96 612 aa8.83□□□□□ -1
NEK3-209ENST00000618856 EDAQ92838 391 aa8.83□□□□□ -1
NEK3-209ENST00000618856 SEMA4DQ92854 862 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms