RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 CERS1P27544 350 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 PCSK6P29122 969 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 DSC2Q02487 901 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 RAPGEF1Q13905 1077 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 TMEM119Q4V9L6 283 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 KHDC1Q4VXA5 237 aaKnown RBP3.92□□□□□ -1.78
TARDBP-220ENST00000618606 AWAT2Q6E213 333 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 CEP85Q6P2H3 762 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 ZNF551Q7Z340 670 aaPredicted RBP3.92□□□□□ -1.78
TARDBP-220ENST00000618606 NEK8Q86SG6 692 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 TTC7BQ86TV6 843 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 FKBP10Q96AY3 582 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 REPS1Q96D71 796 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 VRK1Q99986 396 aaPredicted RBP3.92□□□□□ -1.78
TARDBP-220ENST00000618606 ACTRT3Q9BYD9 372 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 TMX1Q9H3N1 280 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 BRD9Q9H8M2 597 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 ARHGEF3Q9NR81 526 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 TMA7Q9Y2S6 64 aaKnown RBP3.92□□□□□ -1.78
TARDBP-220ENST00000618606 LRP12Q9Y561 859 aa3.92□□□□□ -1.78
TARDBP-220ENST00000618606 ZNF213O14771 459 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 INSIG1O15503 277 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 CHEK2O96017 543 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 RPLP2P05387 115 aaKnown RBP3.91□□□□□ -1.78
TARDBP-220ENST00000618606 GJB1P08034 283 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 IARSP41252 1262 aaKnown RBP3.91□□□□□ -1.78
TARDBP-220ENST00000618606 TOB1P50616 345 aaPredicted RBP3.91□□□□□ -1.78
TARDBP-220ENST00000618606 KRT85P78386 507 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 TBCCQ15814 346 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 TAF2Q6P1X5 1199 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 ZNF66Q6ZN08 573 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 NECAB2Q7Z6G3 386 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 DENND1AQ8TEH3 1009 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 KAT5Q92993 513 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 FAM136AQ96C01 138 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 MRPS18AQ9NVS2 196 aaKnown RBP3.91□□□□□ -1.78
TARDBP-220ENST00000618606 PRKAB1Q9Y478 270 aa3.91□□□□□ -1.78
TARDBP-220ENST00000618606 CFAP20Q9Y6A4 193 aaKnown RBP3.91□□□□□ -1.78
TARDBP-220ENST00000618606 TISP43B9A030 160 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 MYO1FO00160 1098 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 PPP6CO00743 305 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 CLSTN1O94985 981 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 EBLN1P0CF75 366 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 NHLRC4P0CG21 123 aaPredicted RBP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 EPHB2P29323 1055 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 FXR1P51114 621 aaKnown RBP eCLIP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 ACAP2Q15057 778 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 RBM20Q5T481 1227 aaKnown RBP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 ANKRD16Q6P6B7 361 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 DTX2Q86UW9 622 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 DDX42Q86XP3 938 aaKnown RBP eCLIP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 SAMD14Q8IZD0 417 aaPredicted RBP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 PSD4Q8NDX1 1056 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 TBC1D5Q92609 795 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 NELL2Q99435 816 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 CNPPD1Q9BV87 410 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 QTRT1Q9BXR0 403 aaKnown RBP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 GNL3LQ9NVN8 582 aaKnown RBP3.9□□□□□ -1.79
TARDBP-220ENST00000618606 MTMR4Q9NYA4 1195 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 CFAP97Q9P2B7 532 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 AGAP1Q9UPQ3 857 aa3.9□□□□□ -1.79
TARDBP-220ENST00000618606 ZNF785A8K8V0 405 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PRR23D1E9PI22 279 aaPredicted RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 FZD9O00144 591 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PPEF2O14830 753 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 NXPH3O95157 252 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 TUBB4AP04350 444 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 FTH1P19P0C7X4 201 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PRR23D2P0DMB1 279 aaPredicted RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 NDUFB7P17568 137 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 MPGP29372 298 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 ALDH9A1P49189 494 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 POLGP54098 1239 aaPredicted RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PSMC1P62191 440 aaKnown RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 KIF23Q02241 960 aaPredicted RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 LAMB3Q13751 1172 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 KIF22Q14807 665 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 CEP78Q5JTW2 689 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 AARS2Q5JTZ9 985 aaKnown RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 VPS53Q5VIR6 699 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 SLC4A10Q6U841 1118 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PPP1R32Q7Z5V6 425 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 YTHDF3Q7Z739 585 aaKnown RBP3.89□□□□□ -1.79
TARDBP-220ENST00000618606 FAM90A1Q86YD7 464 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 KLHDC4Q8TBB5 520 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 ATRIPQ8WXE1 791 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 TEKT5Q96M29 485 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 SIK2Q9H0K1 926 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 SERHLQ9NQF3 203 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 ANLNQ9NQW6 1124 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 SERPINB13Q9UIV8 391 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 MCM8Q9UJA3 840 aa3.89□□□□□ -1.79
TARDBP-220ENST00000618606 PRRT4C9JH25 899 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 ADAMTS3O15072 1205 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 MT-CO1P00395 513 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 GNAI3P08754 354 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 ITGALP20701 1170 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 PRDX5P30044 214 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms