RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CD19P15391 556 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 CD52P31358 61 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 ZNF132P52740 706 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 HADHBP55084 474 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 LPIN1Q14693 890 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 TCEAL1Q15170 157 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 TRIM71Q2Q1W2 868 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 ZNF618Q5T7W0 954 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 CCDC181Q5TID7 509 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 PAPD7Q5XG87 772 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 DPH6Q7L8W6 267 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 MRPL10Q7Z7H8 261 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 UNC93AQ86WB7 457 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 UBR7Q8N806 425 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 SMG8Q8ND04 991 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 ADAMTS19Q8TE59 1207 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 ZNF653Q96CK0 615 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 NT5C1AQ9BXI3 368 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 GTF3C4Q9UKN8 822 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 BARX2Q9UMQ3 279 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 PCDHGC5Q9Y5F6 944 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 MRFAP1Q9Y605 127 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 SCINQ9Y6U3 715 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 DUSP10Q9Y6W6 482 aa17.84■□□□□ 0.45
TRAPPC3-210ENST00000617904 PRRC2BQ5JSZ5 2229 aaKnown RBP17.83■□□□□ 0.45
TRAPPC3-210ENST00000617904 UQCRHLA0A096LP55 91 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 A0A0U1RQF3 1178 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 NBNO60934 754 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 EOMESO95936 686 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 UQCRHP07919 91 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 VDRP11473 427 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 CHRNB2P17787 502 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 RPL9P32969 192 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 PAFAH1B1P43034 410 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 WDR5P61964 334 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 TCTN1Q2MV58 587 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 SGO2Q562F6 1265 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 C9orf57Q5W0N0 161 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 CCDC70Q6NSX1 233 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 SPRED2Q7Z698 418 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 DAAM2Q86T65 1068 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 ZNF606Q8WXB4 792 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 ATRIPQ8WXE1 791 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 RSPH1Q8WYR4 309 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 DDX1Q92499 740 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 APBB2Q92870 758 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 DDX27Q96GQ7 796 aaKnown RBP17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 TMEM176AQ96HP8 235 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 UROC1Q96N76 676 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 ADAM2Q99965 735 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 PACSIN1Q9BY11 444 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 KLK14Q9P0G3 267 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 AMFRQ9UKV5 643 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 STRIP2Q9ULQ0 834 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.44
TRAPPC3-210ENST00000617904 CITO14578 2027 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 PALMO75781 387 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 LRPAP1P30533 357 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 CENPCQ03188 943 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 RPS6KA1Q15418 735 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 GLRA4Q5JXX5 417 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 CNKSR3Q6P9H4 555 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 TRAF7Q6Q0C0 670 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 APPL2Q8NEU8 664 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 SLC35G2Q8TBE7 412 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 URGCPQ8TCY9 931 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 ARNTL2Q8WYA1 636 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 WNT8BQ93098 351 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 FAM84AQ96KN4 292 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 SNX25Q9H3E2 840 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 AVENQ9NQS1 362 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 SNX9Q9Y5X1 595 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 CAPN6Q9Y6Q1 641 aa17.82■□□□□ 0.44
TRAPPC3-210ENST00000617904 KPNA7A9QM74 516 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 TLL1O43897 1013 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 CILPO75339 1184 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 CYP1A1P04798 512 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 GTF2F1P35269 517 aaKnown RBP eCLIP17.81■□□□□ 0.443e-41■■■■■ 39
TRAPPC3-210ENST00000617904 DEFB103AP81534 67 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 TFF2Q03403 129 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 INCA1Q0VD86 236 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 ZNF394Q53GI3 561 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 TMCO2Q7Z6W1 182 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 TNIP3Q96KP6 325 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 HEXIM2Q96MH2 286 aaKnown RBP17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 UHRF1Q96T88 793 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 THAP2Q9H0W7 228 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 GDAP2Q9NXN4 497 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 KANSL3Q9P2N6 904 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 HESX1Q9UBX0 185 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 SNX12Q9UMY4 172 aa17.81■□□□□ 0.44
TRAPPC3-210ENST00000617904 TFR2Q9UP52 801 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms