RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 ELAVL4P26378 380 aaKnown RBP11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 SREBF1P36956 1147 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 MCMDC2Q4G0Z9 681 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 CD101Q93033 1021 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 ZNF577Q9BSK1 485 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 CSRNP2Q9H175 543 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 FAM124BQ9H5Z6 455 aaPredicted RBP11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 IL21RQ9HBE5 538 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 SUSD2Q9UGT4 822 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 HELZP42694 1942 aaKnown RBP11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 PLXND1Q9Y4D7 1925 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 POLQO75417 2590 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 OTOGQ6ZRI0 2925 aa11.32□□□□□ -0.6
AP003900.1-202ENST00000616952 TMEM150BA6NC51 233 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SUV39H1O43463 412 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 JUPP14923 745 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 ARSAP15289 507 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 GJA4P35212 333 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SEC13P55735 322 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 WNT7BP56706 349 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 CLDN6P56747 220 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SCRN1Q12765 414 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SLC36A4Q6YBV0 504 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SLC41A1Q8IVJ1 513 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 ZNF248Q8NDW4 579 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 NAF1Q96HR8 494 aaKnown RBP11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 HSPA12BQ96MM6 686 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 ANO3Q9BYT9 981 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 KRT23Q9C075 422 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 BTBD3Q9Y2F9 522 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 YIPF1Q9Y548 306 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
AP003900.1-202ENST00000616952 IGLV3-22A0A075B6J6 115 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 TMEM189-UBE2V1I3L0A0 370 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 CILPO75339 1184 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 CER1O95813 267 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 WEE1P30291 646 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 AXLP30530 894 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 VAC14Q08AM6 782 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 KIAA1614Q5VZ46 1190 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 NIFKQ9BYG3 293 aaKnown RBP11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
AP003900.1-202ENST00000616952 I3L4J1 428 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 PTGESO14684 152 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 B3GAT3O94766 335 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 GNSP15586 552 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 TLE1Q04724 770 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 TARDBPQ13148 414 aaKnown RBP eCLIP11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 NAB2Q15742 525 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 GAREM2Q75VX8 874 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 RGL4Q8IZJ4 473 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 TRIML1Q8N9V2 468 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 PANK1Q8TE04 598 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 TSC1Q92574 1164 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 ATXN3LQ9H3M9 355 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 GAREM1Q9H706 876 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 STARD5Q9NSY2 213 aa11.29□□□□□ -0.6
AP003900.1-202ENST00000616952 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 ANTXRLA6NF34 631 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 THP07101 528 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 PCBP4P57723 403 aaKnown RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 PCBP1Q15365 356 aaKnown RBP eCLIP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 PGBD3Q8N328 593 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 JPH2Q9BR39 696 aaPredicted RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 ZNF768Q9H5H4 540 aaKnown RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 MAFFQ9ULX9 164 aa11.28□□□□□ -0.6
AP003900.1-202ENST00000616952 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms