RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 LRMDAQ9H2I8 198 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 TMEM206Q9H813 350 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 RXFP1Q9HBX9 757 aa16.11■□□□□ 0.17
NOP56-220ENST00000616692 H3BUI4 141 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 HDAC3O15379 428 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 KLHL2O95198 593 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 TFPTP0C1Z6 253 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 HSD17B2P37059 387 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 ZNF135P52742 658 aaPredicted RBP16.1■□□□□ 0.17
NOP56-220ENST00000616692 HSP90AA5PQ58FG0 334 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 DENND2CQ68D51 928 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 KLHDC10Q6PID8 442 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 FAM9CQ8IZT9 166 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 GPRC5AQ8NFJ5 357 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 HELQQ8TDG4 1101 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 TRPV6Q9H1D0 765 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 ABI2Q9NYB9 513 aaPredicted RBP16.1■□□□□ 0.17
NOP56-220ENST00000616692 UVRAGQ9P2Y5 699 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 GUCA1BQ9UMX6 200 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
NOP56-220ENST00000616692 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 FOCADQ5VW36 1801 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 CENPBD1B2RD01 187 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 ZNF185O15231 689 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 SNX3O60493 162 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 UNC5CO95185 931 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
NOP56-220ENST00000616692 FUCA1P04066 466 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 CD53P19397 219 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 MNX1P50219 401 aaPredicted RBP16.1■□□□□ 0.17
NOP56-220ENST00000616692 STAT2P52630 851 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 NFE2L1Q14494 772 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 Q3C1V9 767 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 ZNF449Q6P9G9 518 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 DTX3Q8N9I9 347 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 TBC1D20Q96BZ9 403 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 NUDT12Q9BQG2 462 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 FANCFQ9NPI8 374 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 TXLNGQ9NUQ3 528 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 IFT52Q9Y366 437 aa16.1■□□□□ 0.17
NOP56-220ENST00000616692 O00370 1275 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 BLVRAP53004 296 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 CERKLQ49MI3 558 aaPredicted RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 RBM44Q6ZP01 1051 aaKnown RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 METTL2AQ96IZ6 378 aaKnown RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 PHF12Q96QT6 1004 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 TBCBQ99426 244 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 KCNN3Q9UGI6 736 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 NFU1Q9UMS0 254 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 ALPK3Q96L96 1907 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 AQP9O43315 295 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 OPHN1O60890 802 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 ZNF12P17014 697 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 PPARGP37231 505 aaPredicted RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 HMGCS2P54868 508 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 PEX26Q7Z412 305 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 SLC22A8Q8TCC7 542 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 RMDN1Q96DB5 314 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 CCDC51Q96ER9 411 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 RNF41Q9H4P4 317 aaPredicted RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 ARMC7Q9H6L4 198 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 WDR6Q9NNW5 1121 aaKnown RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 WASH6PQ9NQA3 447 aa16.09■□□□□ 0.17
NOP56-220ENST00000616692 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
NOP56-220ENST00000616692 MFAP3LO75121 409 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 SUN1O94901 812 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 KRT6AP02538 564 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 KRT6BP04259 564 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 CALM1P0DP23 149 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 CALM2P0DP24 149 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 CALM3P0DP25 149 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 PLTPP55058 493 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 CHRNEQ04844 493 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 SMARCB1Q12824 385 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
NOP56-220ENST00000616692 NAALADL2Q58DX5 795 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 METTL11BQ5VVY1 283 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 USP17L2Q6R6M4 530 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 ANKRD53Q8N9V6 530 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 C12orf50Q8NA57 414 aaPredicted RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 SLC7A3Q8WY07 619 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 MARCH7Q9H992 704 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 ANO9A1A5B4 782 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 SOBPA7XYQ1 873 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 SNPHO15079 494 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 KATNA1O75449 491 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 OR5F1O95221 314 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 ESRRAP11474 423 aaPredicted RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 TBXAS1P24557 533 aaPredicted RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 MAGOHP61326 146 aaKnown RBP16.08■□□□□ 0.16
NOP56-220ENST00000616692 TMEM63BQ5T3F8 832 aa16.08■□□□□ 0.16
NOP56-220ENST00000616692 PMEPA1Q969W9 287 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms