RNA–Protein interactions for RNA: ENST00000616538.4

NUMA1-233, Transcript of nuclear mitotic apparatus protein 1, human

APPRIS ALT2 TSL 5 BASIC

Gene NUMA1, Length 6,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMA1-233	ENST00000616538	IL1RL2	Q9HB29	575 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	MARCO	Q9UEW3	520 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	TBX20	Q9UMR3	447 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PCDHB12	Q9Y5F1	795 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538		A0A1W2PQC6	194 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PMPCB	O75439	489 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	CKM	P06732	381 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	HSPA9	P38646	679 aa	Known RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	KLK7	P49862	253 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	CLCN3	P51790	818 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	ZNF200	P98182	395 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	MAPRE1	Q15691	268 aa	Known RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	COL23A1	Q86Y22	540 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	ZNF555	Q8NEP9	628 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	TFB1M	Q8WVM0	346 aa	Known RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PRMT6	Q96LA8	375 aa	Predicted RBP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PPP1R2P1	Q96PQ5	205 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PNKP	Q96T60	521 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	NIF3L1	Q9GZT8	377 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	UVRAG	Q9P2Y5	699 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	GGT7	Q9UJ14	662 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	MAP3K7CL	P57077	242 aa		13.61	□□□□□ -0.23
NUMA1-233	ENST00000616538	PDS5A	Q29RF7	1337 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EGFR	P00533	1210 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	POLB	P06746	335 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EPHB2	P29323	1055 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EPHB3	P54753	998 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	DPYD	Q12882	1025 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	TP53BP2	Q13625	1128 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	STAT4	Q14765	748 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	DDI1	Q8WTU0	396 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	TSEN34	Q9BSV6	310 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	DDIT4	Q9NX09	232 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	UBQLN1	Q9UMX0	589 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	ADGRG1	Q9Y653	693 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EIF4E1B	A6NMX2	242 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	IMPDH2	P12268	514 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CAP2	P40123	477 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	PLA2G4A	P47712	749 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	KPNA1	P52294	538 aa	Predicted RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	MTF1	Q14872	753 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CALML6	Q8TD86	181 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	NPHS2	Q9NP85	383 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CDYL	Q9Y232	598 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CASTOR2	A6NHX0	329 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	MLN	P12872	115 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	INPP5A	Q14642	412 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	PLCL1	Q15111	1095 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	UGP2	Q16851	508 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	JADE3	Q92613	823 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	GPRASP2	Q96D09	838 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EPC1	Q9H2F5	836 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	DBR1	Q9UK59	544 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CLASP2	O75122	1294 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	ENO3	P13929	434 aa	Predicted RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	FBXO33	Q7Z6M2	555 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	FAM71D	Q8N9W8	422 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	CCSER1	Q9C0I3	900 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	WWOX	Q9NZC7	414 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	NCF1B	A6NI72	391 aa	Predicted RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	NCF1C	A8MVU1	366 aa	Predicted RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	ANKRD65	E5RJM6	399 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EIF3D	O15371	548 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	NCF1	P14598	390 aa	Predicted RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	MAPK9	P45984	424 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	EXOSC10	Q01780	885 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	SFSWAP	Q12872	951 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	TRIM28	Q13263	835 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	BYSL	Q13895	437 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	PCSK9	Q8NBP7	692 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	PLEKHA8	Q96JA3	519 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	RIT2	Q99578	217 aa		13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	USP42	Q9H9J4	1324 aa	Known RBP	13.6	□□□□□ -0.23
NUMA1-233	ENST00000616538	TBKBP1	A7MCY6	615 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	SLC9A1	P19634	815 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	ACO1	P21399	889 aa	Known RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	GRAMD4	Q6IC98	578 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	ACOT1	Q86TX2	421 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	ADGRF2	Q8IZF7	708 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	1e-6	■■■□□ 14.9
NUMA1-233	ENST00000616538	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	TECPR2	O15040	1411 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	USP27X	A6NNY8	438 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	PTK7	Q13308	1070 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	HORMAD1	Q86X24	394 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	TMEM39A	Q9NV64	488 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	TCP11X1	B4DZS4	312 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	SPTLC1	O15269	473 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	PNMA6A	P0CW24	399 aa	Predicted RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	CARS	P49589	748 aa	Known RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	ERO1B	Q86YB8	467 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	C1orf131	Q8NDD1	294 aa	Known RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	TRPM1	Q7Z4N2	1603 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	IQGAP3	Q86VI3	1631 aa		13.59	□□□□□ -0.23
NUMA1-233	ENST00000616538	C2orf81	A6NN90	581 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms