RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PTPN11Q06124 597 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ASTE1Q2TB18 679 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMC3Q7Z5M5 1100 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 PCDHB18PQ96TA0 734 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 SETD4Q9NVD3 440 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 MYPNQ86TC9 1320 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 COPEO14579 308 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 MYCP01106 439 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ADORA2AP29274 412 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 TNFSF9P41273 254 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 SCYL1Q96KG9 808 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ROPN1BQ9BZX4 212 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 TRABDQ9H4I3 376 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMEM134Q9H6X4 195 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ROPN1Q9HAT0 212 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 AJAP1Q9UKB5 411 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 NCANO14594 1321 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 C4BP0C0L5 1744 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMEM120BA0PK00 339 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 MAP3K6O95382 1288 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 RTP1P59025 263 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 GJC2Q5T442 439 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ARHGAP24Q8N264 748 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 FAM71DQ8N9W8 422 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 PPFIBP2Q8ND30 876 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDC42EP4Q9H3Q1 356 aaKnown RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 RSAD1Q9HA92 442 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 SIX2Q9NPC8 291 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 AVENQ9NQS1 362 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 CNTNAP1P78357 1384 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 GJB1P08034 283 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 JAM2P57087 298 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 AP1B1Q10567 949 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 CELF3Q5SZQ8 465 aaKnown RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF449Q6P9G9 518 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 PLEKHH3Q7Z736 793 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 SCN4BQ8IWT1 228 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 RSRC1Q96IZ7 334 aaKnown RBP13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 GGT7Q9UJ14 662 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 SSX2IPQ9Y2D8 614 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF536O15090 1300 aa13.86□□□□□ -0.19
PPP4R3B-206ENST00000616407 LSM8O95777 96 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 VDRP11473 427 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 HOXD13P35453 343 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 SNCBQ16143 134 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 TFDP3Q5H9I0 405 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 RAPH1Q70E73 1250 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDKL3Q8IVW4 592 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 FHDC1Q9C0D6 1143 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF214Q9UL59 606 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 FAM107AO95990 144 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CD4P01730 458 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 GNL1P36915 607 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 ADCYAP1R1P41586 468 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CCNG2Q16589 344 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 HSDL1Q3SXM5 330 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMEM176AQ96HP8 235 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 VCPIP1Q96JH7 1222 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 OSMRQ99650 979 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 DHX15O43143 795 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 KRT38O76015 456 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 EFHC2Q5JST6 749 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMEM121Q9BTD3 319 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 SMYD2Q9NRG4 433 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 WHRNQ9P202 907 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CHMP2BQ9UQN3 213 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 A0A0G2JND7 137 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF844Q08AG5 666 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 PLCB4Q15147 1175 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 SPOCD1Q6ZMY3 1216 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 C3orf62Q6ZUJ4 267 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CCDC117Q8IWD4 279 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 FOXP3Q9BZS1 431 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 ST6GALNAC4Q9H4F1 302 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
PPP4R3B-206ENST00000616407 CYP1A2P05177 515 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 OTUD4Q01804 1114 aaKnown RBP13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 E2F5Q15329 346 aa13.84□□□□□ -0.19
PPP4R3B-206ENST00000616407 DAB2IPQ5VWQ8 1189 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms