RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 C2orf15Q8WU43 125 aaKnown RBP22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 TASP1Q9H6P5 420 aa22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 RBM12Q9NTZ6 932 aaKnown RBP22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 OBP2AQ9NY56 170 aa22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 DLL3Q9NYJ7 618 aa22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 GTSE1Q9NYZ3 720 aa22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 SEL1LQ9UBV2 794 aa22.42■■□□□ 1.18
TRAPPC3-208ENST00000616074 MYBPHLA2RUH7 354 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 SPECC1L-ADORA2AF8WAN1 911 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 HAPLN1P10915 354 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 GAP43P17677 238 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 CDC25CP30307 473 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 CASP5P51878 434 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 NRLP54845 237 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 CEBPZQ03701 1054 aaKnown RBP22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 ARHGAP29Q52LW3 1261 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 L1TD1Q5T7N2 865 aaKnown RBP22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 C1orf228Q6PIY5 440 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 SV2BQ7L1I2 683 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 NT5DC4Q86YG4 428 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 SAAL1Q96ER3 474 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 ZNF560Q96MR9 790 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 ACCSQ96QU6 501 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 FAM213AQ9BRX8 229 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 ABI2Q9NYB9 513 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 EXOC7Q9UPT5 735 aa22.41■■□□□ 1.18
TRAPPC3-208ENST00000616074 MED19A0JLT2 244 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 GCNT3O95395 438 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 WEE1P30291 646 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 CTHP32929 405 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 TXLNAP40222 546 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 CXCL12P48061 93 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 SMARCB1Q12824 385 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 LRRC32Q14392 662 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 RSPO4Q2I0M5 234 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 BRSK2Q8IWQ3 736 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 BPIFB1Q8TDL5 484 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 SECISBP2LQ93073 1101 aaKnown RBP22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 GCNAQ96QF7 691 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 SMG9Q9H0W8 520 aaKnown RBP22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 TMLHEQ9NVH6 421 aa22.4■■□□□ 1.18
TRAPPC3-208ENST00000616074 ZNF638Q14966 1978 aaKnown RBP22.39■■□□□ 1.18
TRAPPC3-208ENST00000616074 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 SYT1P21579 422 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 POLR2BP30876 1174 aaKnown RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 TFAMQ00059 246 aaKnown RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 TNK2Q07912 1038 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 TAF12Q16514 161 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 Q6ZS52 159 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 RALGPS2Q86X27 583 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 DCP1BQ8IZD4 617 aaKnown RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 SPEM1Q8N4L4 309 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 GPR161Q8N6U8 529 aaKnown RBP22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 C1orf127Q8N9H9 656 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 SLC46A2Q9BY10 475 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 FGFBP2Q9BYJ0 223 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 OLFML3Q9NRN5 406 aa22.39■■□□□ 1.17
TRAPPC3-208ENST00000616074 ITGB3P05106 788 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 IDEP14735 1019 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 PNPLA4P41247 253 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 GPR15P49685 360 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 PON2Q15165 354 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 LPAL2Q16609 132 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 SCARA3Q6AZY7 606 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 TMEM150AQ86TG1 271 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 STKLD1Q8NE28 680 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 FAM84AQ96KN4 292 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 RBAKQ9NYW8 714 aaPredicted RBP22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 AGAP1Q9UPQ3 857 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 PCDHB5Q9Y5E4 795 aa22.38■■□□□ 1.17
TRAPPC3-208ENST00000616074 A0A087X0B3 334 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 FRMD3A2A2Y4 597 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 HMGA1P17096 107 aaKnown RBP22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 TGM1P22735 817 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 PLCB2Q00722 1185 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 TSPY1Q01534 308 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 DMWDQ09019 674 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 DGKKQ5KSL6 1271 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 CCDC73Q6ZRK6 1079 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 CMTM8Q8IZV2 173 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 PDCL2Q8N4E4 241 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 USP28Q96RU2 1077 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 CBWD1Q9BRT8 395 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 PI4K2AQ9BTU6 479 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 PANK2Q9BZ23 570 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 GMEB2Q9UKD1 530 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 L1RE1Q9UN81 338 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 PCDHB13Q9Y5F0 798 aa22.37■■□□□ 1.17
TRAPPC3-208ENST00000616074 GOLGA8IPA6NC78 632 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 GOLGA8JA6NMD2 632 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 LDHAP00338 332 aaKnown RBP22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 GARTP22102 1010 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 STAT6P42226 847 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 SYCP3Q8IZU3 236 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 CELF5Q8N6W0 485 aaKnown RBP22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 CXorf38Q8TB03 319 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 PARD6AQ9NPB6 346 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 C2orf42Q9NWW7 574 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 USP18Q9UMW8 372 aa22.36■■□□□ 1.17
TRAPPC3-208ENST00000616074 CHURC1-FNTBB4DL54 471 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms