RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 LRRTM3Q86VH5 581 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 SPPL2BQ8TCT7 592 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 VRTNQ9H8Y1 702 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 LMBRD1Q9NUN5 540 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 LIMD1Q9UGP4 676 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 SLC27A5Q9Y2P5 690 aa27.16■■□□□ 1.94
SURF1-205ENST00000615505 BICDL2A1A5D9 508 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 PPP1R3GB7ZBB8 358 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 SLC16A3O15427 465 aaKnown RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 VNN1O95497 513 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 RHOP08100 348 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 TRIM49P0CI25 452 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 TRIM49CP0CI26 452 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 WARSP23381 471 aaKnown RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 EPHB3P54753 998 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 SGSM1Q2NKQ1 1148 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 ZNF667Q5HYK9 610 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 INTS6LQ5JSJ4 861 aaKnown RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 OSTM1Q86WC4 334 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 ZC3H3Q8IXZ2 948 aaKnown RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 CRISPLD1Q9H336 500 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 CLSTN2Q9H4D0 955 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 EPHX3Q9H6B9 360 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 NXF1Q9UBU9 619 aaKnown RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 PCDHB5Q9Y5E4 795 aa27.15■■□□□ 1.94
SURF1-205ENST00000615505 ZFP37Q9Y6Q3 630 aaPredicted RBP27.15■■□□□ 1.94
SURF1-205ENST00000615505 STX10O60499 249 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 N4BP1O75113 896 aaKnown RBP27.14■■□□□ 1.94
SURF1-205ENST00000615505 TACC1O75410 805 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 ACAT1P24752 427 aaKnown RBP27.14■■□□□ 1.94
SURF1-205ENST00000615505 GTF2H1P32780 548 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 GCLMP48507 274 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 MCCD1P59942 119 aaPredicted RBP27.14■■□□□ 1.94
SURF1-205ENST00000615505 KBTBD7Q8WVZ9 684 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 NELFBQ8WX92 580 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 TAF4BQ92750 862 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 MYADMQ96S97 322 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 CORO1BQ9BR76 489 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 SNX25Q9H3E2 840 aa27.14■■□□□ 1.94
SURF1-205ENST00000615505 AVENQ9NQS1 362 aaPredicted RBP27.14■■□□□ 1.94
SURF1-205ENST00000615505 P4HA1P13674 534 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 GNL1P36915 607 aaPredicted RBP27.13■■□□□ 1.93
SURF1-205ENST00000615505 PIK3CAP42336 1068 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 MGAT5BQ3V5L5 792 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 FOXR2Q6PJQ5 311 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 LEMD2Q8NC56 503 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 SEPT5Q99719 369 aaPredicted RBP27.13■■□□□ 1.93
SURF1-205ENST00000615505 MMRN2Q9H8L6 949 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 ABI2Q9NYB9 513 aaPredicted RBP27.13■■□□□ 1.93
SURF1-205ENST00000615505 CEP72Q9P209 647 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 EPS15L1Q9UBC2 864 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 CDH9Q9ULB4 789 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 MRPS23Q9Y3D9 190 aaKnown RBP27.13■■□□□ 1.93
SURF1-205ENST00000615505 ASB3Q9Y575 518 aa27.13■■□□□ 1.93
SURF1-205ENST00000615505 MUC3AQ02505 3323 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 HLA-DRAP01903 254 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 PPP3CAQ08209 521 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 PTPN21Q16825 1174 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 CYP4A22Q5TCH4 519 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 OR6B3Q8NGW1 331 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 CEP63Q96MT8 703 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 MRPL45Q9BRJ2 306 aaKnown RBP27.12■■□□□ 1.93
SURF1-205ENST00000615505 C1QTNF1Q9BXJ1 281 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 IMPG2Q9BZV3 1241 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 TMEM8AQ9HCN3 771 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 GTF3C4Q9UKN8 822 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 CDH7Q9ULB5 785 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 CTNND2Q9UQB3 1225 aa27.12■■□□□ 1.93
SURF1-205ENST00000615505 ZNF197O14709 1029 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 HAPLN1P10915 354 aaPredicted RBP27.11■■□□□ 1.93
SURF1-205ENST00000615505 LAMP2P13473 410 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 LMO2P25791 158 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 CDR1P51861 262 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 PAK1Q13153 545 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 KRT39Q6A163 491 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 PDZD4Q76G19 769 aaPredicted RBP27.11■■□□□ 1.93
SURF1-205ENST00000615505 FILIP1Q7Z7B0 1213 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 TTC9BQ8N6N2 239 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 ITFG1Q8TB96 612 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 SYT15Q9BQS2 421 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 NUP62CLQ9H1M0 184 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 ASAH2Q9NR71 780 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 TMLHEQ9NVH6 421 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 IGSF9Q9P2J2 1179 aa27.11■■□□□ 1.93
SURF1-205ENST00000615505 ARMCX3Q9UH62 379 aaPredicted RBP27.11■■□□□ 1.93
SURF1-205ENST00000615505 PDGFRBP09619 1106 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 VEPH1Q14D04 833 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 MAPRE1Q15691 268 aaKnown RBP27.1■■□□□ 1.93
SURF1-205ENST00000615505 TCERG1LQ5VWI1 586 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 TTI2Q6NXR4 508 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 ITIH5Q86UX2 942 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 CCDC150Q8NCX0 1101 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 FAM200AQ8TCP9 573 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 FGF13Q92913 245 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 PKMYT1Q99640 499 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 DUSP9Q99956 384 aaKnown RBP27.1■■□□□ 1.93
SURF1-205ENST00000615505 PI4K2AQ9BTU6 479 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 METTL14Q9HCE5 456 aaKnown RBP27.1■■□□□ 1.93
SURF1-205ENST00000615505 ABCB6Q9NP58 842 aa27.1■■□□□ 1.93
SURF1-205ENST00000615505 SORCS3Q9UPU3 1222 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms