RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 AKAP3O75969 853 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 VTNP04004 478 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 CYP2C9P11712 490 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ACADSP16219 412 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ANXA13P27216 316 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TSNAXIP1Q2TAA8 658 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TMEM154Q6P9G4 183 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TSEN34Q9BSV6 310 aaKnown RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 FAM49AQ9H0Q0 323 aaPredicted RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 RAB17Q9H0T7 212 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TMEM206Q9H813 350 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TBX20Q9UMR3 447 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 MBLAC1A4D2B0 266 aaPredicted RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 NCALDP61601 193 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ADAM17P78536 824 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TFDP1Q14186 410 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
FOXN3-219ENST00000615335 KIAA0319LQ8IZA0 1049 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 LRRC57Q8N9N7 239 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ACTRT1Q8TDG2 376 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ACCSQ96QU6 501 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 SYT15Q9BQS2 421 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ZCWPW1Q9H0M4 648 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 TMEM165Q9HC07 324 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ADAM22Q9P0K1 906 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 ARHGAP28Q9P2N2 729 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 GTF2IRD1Q9UHL9 959 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 UBE4BO95155 1302 aa13.84□□□□□ -0.19
FOXN3-219ENST00000615335 K7ERI5 159 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 MSH2P43246 934 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 ITGA7Q13683 1181 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 TRADDQ15628 312 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 ZNF333Q96JL9 665 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 ISCUQ9H1K1 167 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 FBXL5Q9UKA1 691 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.19
FOXN3-219ENST00000615335 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 H0YGN5 161 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 H2AFZP0C0S5 128 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 CASP4P49662 377 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 KCNJ2P63252 427 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 STRN3Q13033 797 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 HLTFQ14527 1009 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■■□□□ 12.3
FOXN3-219ENST00000615335 SH2D4BQ5SQS7 431 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 GDF6Q6KF10 455 aaPredicted RBP13.83□□□□□ -0.2
FOXN3-219ENST00000615335 IRGCQ6NXR0 463 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 H2AFVQ71UI9 128 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 TPCN2Q8NHX9 752 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 SLC35C1Q96A29 364 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 IFT43Q96FT9 208 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 NDNQ99608 321 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 GOLPH3Q9H4A6 298 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 ECT2Q9H8V3 914 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 SIX2Q9NPC8 291 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 GALNT8Q9NY28 637 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 GCNT4Q9P109 453 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 NFS1Q9Y697 457 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
FOXN3-219ENST00000615335 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 PGRMC1O00264 195 aaKnown RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 CLIC2O15247 247 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 RARAP10276 462 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 GNAZP19086 355 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 HOXC8P31273 242 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 JAM2P57087 298 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 HS2ST1Q7LGA3 356 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 C17orf50Q8WW18 174 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 PPP1R14BQ96C90 147 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 KLHL29Q96CT2 875 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 ARHGEF3Q9NR81 526 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 SCOCQ9UIL1 159 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 AJAP1Q9UKB5 411 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 NENFQ9UMX5 172 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 EXOC7Q9UPT5 735 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 GINS2Q9Y248 185 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 WDR37Q9Y2I8 494 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 A0A087WZ62 844 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 GTPBP10A4D1E9 387 aaKnown RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 TGFB1I1O43294 461 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 EFNA5P52803 228 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms