RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 HESX1Q9UBX0 185 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 G3BP2Q9UN86 482 aaKnown RBP6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 PLEKHM1Q9Y4G2 1056 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 RAD54BQ9Y620 910 aa6.36□□□□□ -1.39
SCAMP1-205ENST00000614488 FAM227AF5H4B4 570 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 TRIAP1O43715 76 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 PPP3CBP16298 524 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 ITGALP20701 1170 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 KCNJ5P48544 419 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 NXPH1P58417 271 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 ITIH3Q06033 890 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 MLC1Q15049 377 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 PTPRRQ15256 657 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 CELF5Q8N6W0 485 aaKnown RBP6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 B3GALNT2Q8NCR0 500 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 SMOC2Q9H3U7 446 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 METTL14Q9HCE5 456 aaKnown RBP6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 FOXJ2Q9P0K8 574 aa6.35□□□□□ -1.39
SCAMP1-205ENST00000614488 F5H697 171 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 VPS4BO75351 444 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 UNC5CO95185 931 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 THP07101 528 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 GCLCP48506 637 aaPredicted RBP6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 NPNTQ6UXI9 565 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 MYO1HQ8N1T3 1032 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 FAM109AQ8N4B1 249 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 MYCBPAPQ8TBZ2 947 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 KBTBD7Q8WVZ9 684 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 ZG16BQ96DA0 208 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 PDLIM2Q96JY6 352 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 B3GNT5Q9BYG0 378 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 ALG13Q9NP73 1137 aaKnown RBP6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 STAP2Q9UGK3 403 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 CPA4Q9UI42 421 aa6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 POLR2AP24928 1970 aaKnown RBP6.34□□□□□ -1.39
SCAMP1-205ENST00000614488 SALL3Q9BXA9 1300 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 A0A1W2PPL8 197 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 CCDC151A5D8V7 595 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 ZAR1LA6NP61 321 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 PHGDHO43175 533 aaKnown RBP6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 GRPP07492 148 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 ATXN1LP0C7T5 689 aaKnown RBP6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 CHRM3P20309 590 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 BMP5P22003 454 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 SIM1P81133 766 aaPredicted RBP6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 AMOTQ4VCS5 1084 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 KIAA0319LQ8IZA0 1049 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 PCSK9Q8NBP7 692 aaKnown RBP6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 CAGE1Q8TC20 777 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 FBXL20Q96IG2 436 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 MOGAT1Q96PD6 335 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 TRIM54Q9BYV2 358 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 ZNHIT2Q9UHR6 403 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 INSL6Q9Y581 213 aa6.33□□□□□ -1.4
SCAMP1-205ENST00000614488 GOLGA6CA6NDK9 693 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 GOLGA6BA6NDN3 693 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 CAPN8A6NHC0 703 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 PPM1GO15355 546 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 ORC4O43929 436 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 GOLGA6DP0CG33 693 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 NPR1P16066 1061 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 CD6P30203 668 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 PLA2G5P39877 138 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 VIPR2P41587 438 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 RARRES1P49788 294 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 ARFIP2P53365 341 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 LOXL3P58215 753 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 BOP1Q14137 746 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 LONRF3Q496Y0 759 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 RBM20Q5T481 1227 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 MAEAQ7L5Y9 396 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 TOR1AIP2Q8NFQ8 470 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 FBXO41Q8TF61 875 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 SLC46A1Q96NT5 459 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 NELL2Q99435 816 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 FAM204AQ9H8W3 233 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 ZMAT3Q9HA38 289 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 GOLGA6AQ9NYA3 693 aa6.32□□□□□ -1.4
SCAMP1-205ENST00000614488 WDR27A2RRH5 827 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 KIAA0355O15063 1070 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 MARCH6O60337 910 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 NUDT3O95989 172 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 MYBP10242 640 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 CLK3P49761 638 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 HNRNPMP52272 730 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 TXNRD1Q16881 649 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 ARHGAP29Q52LW3 1261 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 STRIP1Q5VSL9 837 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 KAZNQ674X7 775 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 SFRP4Q6FHJ7 346 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 FAM136AQ96C01 138 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 NT5C1BQ96P26 610 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 PUS7Q96PZ0 661 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 DUSP26Q9BV47 211 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 DPH1Q9BZG8 443 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms