RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 LRRC45Q96CN5 670 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 NUB1Q9Y5A7 615 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 GRID2IPA4D2P6 1211 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 DDX3XO00571 662 aaKnown RBP eCLIP10.55□□□□□ -0.721e-12■■□□□ 12.3
GGA3-221ENST00000614198 CEP104O60308 925 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 HLA-DRAP01903 254 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 KRT19P08727 400 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 CD58P19256 250 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 ABCB4P21439 1286 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 PAPOLAP51003 745 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 MYL6P60660 151 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 TBC1D25Q3MII6 688 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 FBXL13Q8NEE6 735 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 UHMK1Q8TAS1 419 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 GGT7Q9UJ14 662 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 LACTBL1A8MY62 500 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 PJA2O43164 708 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 WEE2P0C1S8 567 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 STAG3L1P0CL83 205 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 CPT1AP50416 773 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 CCNG1P51959 295 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 SLC9C1Q4G0N8 1177 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 TSHZ1Q6ZSZ6 1077 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 RAET1EQ8TD07 263 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 HHIPL1Q96JK4 782 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 ISCUQ9H1K1 167 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 NXF3Q9H4D5 531 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 CNOT10Q9H9A5 744 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 TMEM8AQ9HCN3 771 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 KCNK3O14649 394 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PPEF2O14830 753 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ASAP2O43150 1006 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 UPP2O95045 317 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 NPTXRO95502 500 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SERPING1P05155 500 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 VIMP08670 466 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 KRT5P13647 590 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 CDH8P55286 799 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ADAM17P78536 824 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ROR2Q01974 943 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 MFSD14CQ5VZR4 134 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 ANKRD27Q96NW4 1050 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PAIP2Q9BPZ3 127 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 AP1M1Q9BXS5 423 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SNTG2Q9NY99 539 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 AIPL1Q9NZN9 384 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 CPSF3Q9UKF6 684 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ANK1P16157 1881 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 CASP8AP2Q9UKL3 1982 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 RARBP10826 455 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PROZP22891 400 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SOX5P35711 763 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 IFNAR2P48551 515 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 EFNA5P52803 228 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 MCL1Q07820 350 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PSMD6Q15008 389 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 JADE1Q6IE81 842 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 NOP9Q86U38 636 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PASD1Q8IV76 773 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 IQCDQ96DY2 449 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 PCDHB18PQ96TA0 734 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 GOLGA2P5Q9HBQ8 144 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PAPOLBQ9NRJ5 636 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 SRRDQ9UH36 339 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 STK38LQ9Y2H1 464 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 HAS3O00219 553 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SEPT4O43236 478 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PIGRP01833 764 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 MMEP08473 750 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ABL2P42684 1182 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PHKA2P46019 1235 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 TNNC1P63316 161 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 USP4Q13107 963 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 CUL1Q13616 776 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 TFDP1Q14186 410 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SLC10A6Q3KNW5 377 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 PIGWQ7Z7B1 504 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 TEX9Q8N6V9 391 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms