RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 DSG1Q02413 1049 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 DSTYKQ6XUX3 929 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 SPOCD1Q6ZMY3 1216 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 SETD3Q86TU7 594 aaPredicted RBP11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 TAS1R2Q8TE23 839 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 APBB2Q92870 758 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 ZNF560Q96MR9 790 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 PAFAH2Q99487 392 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 VPS33BQ9H267 617 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 XAB2Q9HCS7 855 aaKnown RBP11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 KCNMB3Q9NPA1 279 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
CDC42EP3-206ENST00000611976 F5H423 210 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 OVGP1Q12889 678 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 LRRC6Q86X45 466 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 ARID3BQ8IVW6 561 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 ARHGEF19Q8IW93 802 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 C4orf19Q8IY42 314 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 MCOLN2Q8IZK6 566 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 RYBPQ8N488 228 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SCFD2Q8WU76 684 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 MAGEB5Q9BZ81 275 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 EML4Q9HC35 981 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 AVENQ9NQS1 362 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 METTL5Q9NRN9 209 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 CDY2AQ9Y6F7 541 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 CDY1Q9Y6F8 540 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 VEGFAP15692 232 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 ADORA2BP29275 332 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 IQCKQ8N0W5 287 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 FAM193BQ96PV7 902 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 PCDH9Q9HC56 1237 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 NINJ2Q9NZG7 142 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 FAM86B1E9PN63 330 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SLITRK3O94933 977 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 FAM86B2P0C5J1 330 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 STMN1P16949 149 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 EEF1DP29692 281 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 NFIAQ12857 509 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 ZBTB17Q13105 803 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 APOBEC3FQ8IUX4 373 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 HES6Q96HZ4 224 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 SPRP35270 261 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 GCNT1Q02742 428 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 TRIP10Q15642 601 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 CRELD2Q6UXH1 353 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 GPRC5CQ9NQ84 441 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 CPSF3Q9UKF6 684 aaKnown RBP11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
CDC42EP3-206ENST00000611976 DNALI1O14645 258 aaPredicted RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 COPAP53621 1224 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 UGP2Q16851 508 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 HAS1Q92839 578 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 FAM49AQ9H0Q0 323 aaPredicted RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 RNF103-CHMP3A0A140T963 221 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 CYP3A4P08684 503 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 BIRC2Q13490 618 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TRADDQ15628 312 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 CYP4A22Q5TCH4 519 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 MTDHQ86UE4 582 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TEKT4Q8WW24 435 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 SEPT1Q8WYJ6 367 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 PBXIP1Q96AQ6 731 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TAAR1Q96RJ0 339 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 MMTAG2Q9BU76 263 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 DNAJC18Q9H819 358 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 NSMCE4AQ9NXX6 385 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 CYP3A7-CYP3A51PA0A087WV96 503 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 POLRMTO00411 1230 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 PSMD3O43242 534 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 CYP3A7P24462 503 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 RPS6P62753 249 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 SATB1Q01826 763 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TMEM132DQ14C87 1099 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 FASTKD1Q53R41 847 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms