RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 SULT1E1P49888 294 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GNASQ5JWF2 1037 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 REPS2Q8NFH8 660 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 TMEM121Q9BTD3 319 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 FIS1Q9Y3D6 152 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SLC26A2P50443 739 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 TSPY1Q01534 308 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 PTPN11Q06124 597 aaPredicted RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 THOC5Q13769 683 aaKnown RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 TRADDQ15628 312 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 MUM1Q2TAK8 710 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 FAM71AQ8IYT1 594 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SHC3Q92529 594 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 CCDC68Q9H2F9 335 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 HAUS2Q9NVX0 235 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 POLIQ9UNA4 740 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 FAM107AO95990 144 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GSTA1P08263 222 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GSTA2P09210 222 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 DCAF6Q58WW2 860 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 CCDC33Q8N5R6 958 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 KLRG1Q96E93 195 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 OSMRQ99650 979 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GPATCH2LQ9NWQ4 482 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 H3BRJ5 948 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 TXNDC9O14530 226 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 ESRRAP11474 423 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 GNL1P36915 607 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 ASPHQ12797 758 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 LRRC37BQ96QE4 947 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 PCDHA3Q9Y5H8 950 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 CES2O00748 559 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 CDC42EP1Q00587 391 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 OTUD4Q01804 1114 aaKnown RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 TMC3Q7Z5M5 1100 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 ATXN7L3BQ96GX2 97 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 ROPN1BQ9BZX4 212 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 ROPN1Q9HAT0 212 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 ZC3H7BQ9UGR2 993 aaKnown RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 ACKR2O00590 384 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 ZBTB22O15209 634 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 FMO1Q01740 532 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 CACNB2Q08289 660 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 GJC2Q5T442 439 aaPredicted RBP13.79□□□□□ -0.2
TCF3-220ENST00000611869 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 PPP1R13LQ8WUF5 828 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
TCF3-220ENST00000611869 NKRFO15226 690 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■□□□ 12.8
TCF3-220ENST00000611869 CD4P01730 458 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 MAP2K2P36507 400 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
TCF3-220ENST00000611869 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
TCF3-220ENST00000611869 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 MFSD14CQ5VZR4 134 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 OR5B17Q8NGF7 314 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 EXD1Q8NHP7 514 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 CHST7Q9NS84 486 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 BFARQ9NZS9 450 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
TCF3-220ENST00000611869 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
TCF3-220ENST00000611869 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 ZFXP17010 805 aaPredicted RBP13.78□□□□□ -0.2
TCF3-220ENST00000611869 SPATA21Q7Z572 469 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 RIOX2Q8IUF8 465 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 CRLF3Q8IUI8 442 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 ACTL9Q8TC94 416 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 FAM47DPA6NHR8 397 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 SPATA31C2B4DYI2 1134 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 ATP9BO43861 1147 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 DCTN3O75935 186 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 LYPLA2O95372 231 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 GJB1P08034 283 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 VDRP11473 427 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 NCKAP1LP55160 1127 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 SPIRE1Q08AE8 756 aa13.78□□□□□ -0.2
TCF3-220ENST00000611869 RPS6KA2Q15349 733 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms