RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
SRRT-213ENST00000611405 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
SRRT-213ENST00000611405 MCM3APO60318 1980 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 P4HA1P13674 534 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 ITGA8P53708 1063 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 GJC2Q5T442 439 aaPredicted RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 JADE1Q6IE81 842 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 DRICH1Q6PGQ1 229 aaPredicted RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 CCHCR1Q8TD31 782 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 CENPTQ96BT3 561 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 CCT8L2Q96SF2 557 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 TLDC2A0PJX2 215 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 F8VP50 259 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 MYO1CO00159 1063 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 FAM107AO95990 144 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 GCLCP48506 637 aaPredicted RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 RAD23BP54727 409 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 OGDHQ02218 1023 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 ZNF473Q8WTR7 871 aaKnown RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 CDC42EP4Q9H3Q1 356 aaKnown RBP12.6□□□□□ -0.39
SRRT-213ENST00000611405 WDR35Q9P2L0 1181 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
SRRT-213ENST00000611405 GMNCA6NCL1 334 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 SIGLEC16A6NMB1 481 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 RASGRF2O14827 1237 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 ITGB3P05106 788 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 RAP1GAPP47736 663 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 GSCP56915 257 aaPredicted RBP12.59□□□□□ -0.39
SRRT-213ENST00000611405 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
SRRT-213ENST00000611405 ATP13A4Q4VNC1 1196 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 MFSD7Q6UXD7 560 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 CEP128Q6ZU80 1094 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 ANKS1BQ7Z6G8 1248 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 MYCBPAPQ8TBZ2 947 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 C16orf70Q9BSU1 422 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 FOXP3Q9BZS1 431 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 E7EVH7 732 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 PI4K2BG5E9Z4 385 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 LIASO43766 372 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 CHKAP35790 457 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 GTF2A2P52657 109 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 CORO7P57737 925 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 FNIP1Q8TF40 1166 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 SDCBP2Q9H190 292 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 FAM124BQ9H5Z6 455 aaPredicted RBP12.59□□□□□ -0.39
SRRT-213ENST00000611405 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
SRRT-213ENST00000611405 KLHL11Q9NVR0 708 aa12.59□□□□□ -0.39
SRRT-213ENST00000611405 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 MEFVO15553 781 aaPredicted RBP12.58□□□□□ -0.39
SRRT-213ENST00000611405 VTNP04004 478 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 ZNF286BP0CG31 522 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 KRT3P12035 628 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 TCF4P15884 667 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.39
SRRT-213ENST00000611405 KLRC2P26717 231 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 ADCYAP1R1P41586 468 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 SEC24CP53992 1094 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 CDH8P55286 799 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 MICALCLQ6ZW33 695 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 SLC4A11Q8NBS3 891 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 CPB2Q96IY4 423 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 SMYD3Q9H7B4 428 aa12.58□□□□□ -0.39
SRRT-213ENST00000611405 DRG1Q9Y295 367 aaKnown RBP12.58□□□□□ -0.39
SRRT-213ENST00000611405 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 BTBD19C9JJ37 291 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 H3BRB1 525 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 CILPO75339 1184 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 KRT10P13645 584 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 PSMA2P25787 234 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 MMP13P45452 471 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 PSMC1P62191 440 aaKnown RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 PTPN11Q06124 597 aaPredicted RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 TNFAIP8L3Q5GJ75 292 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 UBAP2Q5T6F2 1119 aaKnown RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 IZUMO3Q5VZ72 239 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 KAZNQ674X7 775 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
SRRT-213ENST00000611405 UHMK1Q8TAS1 419 aaKnown RBP12.58□□□□□ -0.4
SRRT-213ENST00000611405 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms