RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	NAB2	Q15742	525 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	TLK2	Q86UE8	772 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	TSEN2	Q8NCE0	465 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ATL2	Q8NHH9	583 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	MORC4	Q8TE76	937 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ARHGAP39	Q9C0H5	1083 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	TMEM134	Q9H6X4	195 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	NOVA2	Q9UNW9	492 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	UTP11	Q9Y3A2	253 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	PAPPA2	Q9BXP8	1791 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232		A0A0B4J269	797 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232		M0QYV0	167 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	SGK1	O00141	431 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	MAPK13	O15264	365 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	KIF4A	O95239	1232 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	CALR	P27797	417 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ACTN3	Q08043	901 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	COL9A2	Q14055	689 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	TAF5	Q15542	800 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	IFI16	Q16666	785 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ASTE1	Q2TB18	679 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZNF365	Q70YC5	407 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	CREG2	Q8IUH2	290 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	GPR152	Q8TDT2	470 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	C18orf25	Q96B23	403 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	B3GNT5	Q9BYG0	378 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	MAGEB5	Q9BZ81	275 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	COG5	Q9UP83	839 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	MYO18A	Q92614	2054 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232		F8VP50	259 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	C2CD2L	O14523	706 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ASAP2	O43150	1006 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	POMC	P01189	267 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	MMP3	P08254	477 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	NFIC	P08651	508 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	PYGM	P11217	842 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	CYP11B1	P15538	503 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	TCP1	P17987	556 aa	Known RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	JAM2	P57087	298 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZPBP2	Q6X784	338 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	SCUBE3	Q8IX30	993 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	ERVK-5	Q9HDB9	667 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	STIM2	Q9P246	746 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	FBXL5	Q9UKA1	691 aa		10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.39	□□□□□ -0.75
CTCFL-222	ENST00000609232	CASTOR2	A6NHX0	329 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZBTB42	B2RXF5	422 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PGRMC1	O00264	195 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	KIAA0391	O15091	583 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	CHUK	O15111	745 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	OGT	O15294	1046 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	C22orf31	O95567	290 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	TNNC2	P02585	160 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	RFX1	P22670	979 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PSMD6	Q15008	389 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	TDRD10	Q5VZ19	366 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	CTAGE3P	Q8IX95	158 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	HACE1	Q8IYU2	909 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ACO2	Q99798	780 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	HAPLN2	Q9GZV7	340 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	SIK2	Q9H0K1	926 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	VPS37B	Q9H9H4	285 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	LOC285556	D6RIA3	1793 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	GOLGA8K	D6RF30	607 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232		E7EVH7	732 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ACKR2	O00590	384 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	MSC	O60682	206 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	VIM	P08670	466 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	IGFBP6	P24592	240 aa	Predicted RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PRKCI	P41743	596 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	INHBE	P58166	350 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	BASP1	P80723	227 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	UBAP2	Q5T6F2	1119 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	MAMDC4	Q6UXC1	1216 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	FBXL18	Q96ME1	805 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PPME1	Q9Y570	386 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	LOXHD1	Q8IVV2	1947 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	GOLGA6L7	A0A1B0GV03	622 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	MOCS2	O96007	188 aa	Predicted RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	CLNS1A	P54105	237 aa	Known RBP	10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PTEN	P60484	403 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	IFT88	Q13099	833 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	RAB6C	Q53S08	254 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	TRAPPC11	Q7Z392	1133 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	TPCN2	Q8NHX9	752 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	LMO3	Q8TAP4	145 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZNF516	Q92618	1163 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ADPGK	Q9BRR6	497 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	RAB6C	Q9H0N0	254 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	SMYD3	Q9H7B4	428 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	FLRT1	Q9NZU1	646 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	HMGXB4	Q9UGU5	601 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	PLAA	Q9Y263	795 aa		10.38	□□□□□ -0.75
CTCFL-222	ENST00000609232	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms