RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 POU2F2P09086 479 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 WARSP23381 471 aaKnown RBP15.23■□□□□ 0.03
TUBE1-211ENST00000605457 ELF1P32519 619 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 MYL7Q01449 175 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 SGSM1Q2NKQ1 1148 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 SLC39A12Q504Y0 691 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 ZNF667Q5HYK9 610 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 CCDC183Q5T5S1 534 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 TCERG1LQ5VWI1 586 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 TAF4BQ92750 862 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 CRISPLD1Q9H336 500 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
TUBE1-211ENST00000605457 POLIQ9UNA4 740 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 OBSL1O75147 1896 aa15.23■□□□□ 0.03
TUBE1-211ENST00000605457 ZNF638Q14966 1978 aaKnown RBP15.23■□□□□ 0.03
TUBE1-211ENST00000605457 CCL16O15467 120 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 HCRTO43612 131 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 ACAT1P24752 427 aaKnown RBP15.22■□□□□ 0.03
TUBE1-211ENST00000605457 PCSK1P29120 753 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
TUBE1-211ENST00000605457 TSPY1Q01534 308 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 CCDC40Q4G0X9 1142 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 CBWD6Q4V339 395 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 INTS6LQ5JSJ4 861 aaKnown RBP15.22■□□□□ 0.03
TUBE1-211ENST00000605457 CBWD3Q5JTY5 395 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 CBWD5Q5RIA9 395 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 LRRTM3Q86VH5 581 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 PKMYT1Q99640 499 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 MRPL45Q9BRJ2 306 aaKnown RBP15.22■□□□□ 0.03
TUBE1-211ENST00000605457 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
TUBE1-211ENST00000605457 SMYD3Q9H7B4 428 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
TUBE1-211ENST00000605457 C19orf67A6NJJ6 358 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 CLSTN1O94985 981 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 GNA14O95837 355 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 FAM163BP0C2L3 166 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 LMO2P25791 158 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
TUBE1-211ENST00000605457 SMARCB1Q12824 385 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 DUSP4Q13115 394 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
TUBE1-211ENST00000605457 TTC9BQ8N6N2 239 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 ATAD1Q8NBU5 361 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 FBXL13Q8NEE6 735 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 PI4K2AQ9BTU6 479 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 IMPG2Q9BZV3 1241 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 PIDD1Q9HB75 910 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 WDR6Q9NNW5 1121 aaKnown RBP15.21■□□□□ 0.03
TUBE1-211ENST00000605457 HSFX1Q9UBD0 423 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 DACH1Q9UI36 760 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 NME7Q9Y5B8 376 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 CLUHO75153 1309 aa15.21■□□□□ 0.03
TUBE1-211ENST00000605457 XYLBO75191 536 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 LRRN2O75325 713 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.02
TUBE1-211ENST00000605457 LRG1P02750 347 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.02
TUBE1-211ENST00000605457 ASPAP45381 313 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 CCDC142Q17RM4 750 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 SCARA5Q6ZMJ2 495 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 C2orf15Q8WU43 125 aaKnown RBP15.21■□□□□ 0.02
TUBE1-211ENST00000605457 SEMA4DQ92854 862 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 APOBEC3GQ9HC16 384 aaKnown RBP15.21■□□□□ 0.02
TUBE1-211ENST00000605457 CD320Q9NPF0 282 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 TMLHEQ9NVH6 421 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 COQ4Q9Y3A0 265 aa15.21■□□□□ 0.02
TUBE1-211ENST00000605457 LOC730098B7Z3J9 87 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 P4HA1P13674 534 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 CDR1P51861 262 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 NFE2Q16621 373 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-211ENST00000605457 GRASPQ7Z6J2 395 aaPredicted RBP15.2■□□□□ 0.02
TUBE1-211ENST00000605457 SPPL2BQ8TCT7 592 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 BCO2Q9BYV7 579 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 SDCBP2Q9H190 292 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.02
TUBE1-211ENST00000605457 HCFC1R1Q9NWW0 138 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 RAB20Q9NX57 234 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 GTF3C4Q9UKN8 822 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 CDH9Q9ULB4 789 aa15.2■□□□□ 0.02
TUBE1-211ENST00000605457 ATP2C2O75185 946 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-211ENST00000605457 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-211ENST00000605457 FMO5P49326 533 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 CDH8P55286 799 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
TUBE1-211ENST00000605457 TWF1Q12792 350 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 CT47A1Q5JQC4 288 aaPredicted RBP15.19■□□□□ 0.02
TUBE1-211ENST00000605457 FAM171BQ6P995 826 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 GJD3Q8N144 294 aa15.19■□□□□ 0.02
TUBE1-211ENST00000605457 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms