RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DCDC2CA8MYV0 355 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ENC1O14682 589 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 HOXA2O43364 376 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TUBBP07437 444 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RFC2P35250 354 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RAP1GAPP47736 663 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GABRB2P47870 512 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CDH8P55286 799 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SEPT8Q92599 483 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 NUP85Q9BW27 656 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CARD9Q9H257 536 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PUF60Q9UHX1 559 aaKnown RBP13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 DSEQ9UL01 958 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 COG5Q9UP83 839 aa13.04□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TCRBV5S1A1TA0A578 114 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CCDC66A2RUB6 948 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PODXLO00592 558 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GABRDO14764 452 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PPEF2O14830 753 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CD19P15391 556 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CTNNA2P26232 953 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SCNN1AP37088 669 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 PAFAH1B1P43034 410 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GJA8P48165 433 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 LHX1P48742 406 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 UPP1Q16831 310 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 FNIP1Q8TF40 1166 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 KBTBD7Q8WVZ9 684 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 CPA5Q8WXQ8 436 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RUBCNQ92622 972 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 TWNKQ96RR1 684 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
NEDD8-MDP1-203ENST00000604306 FTCDO95954 541 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CYP11A1P05108 521 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RRM1P23921 792 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GPD2P43304 727 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SCNN1GP51170 649 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DSC1Q08554 894 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ACAP1Q15027 740 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ZNF394Q53GI3 561 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CREG2Q8IUH2 290 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ZDHHC17Q8IUH5 632 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NIPA2Q8N8Q9 360 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 C1orf131Q8NDD1 294 aaKnown RBP13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 UBXN4Q92575 508 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CD101Q93033 1021 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NAP1L3Q99457 506 aaPredicted RBP13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MRPL45Q9BRJ2 306 aaKnown RBP13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 C11orf70Q9BRQ4 267 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HMGXB4Q9UGU5 601 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CENPFP49454 3210 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MEIS3P2A8K0S8 358 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 A8MXQ7 604 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 M0QZQ0 153 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MYO1FO00160 1098 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SPTLC1O15269 473 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NBNO60934 754 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MICAL2O94851 1124 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CFHP08603 1231 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ODC1P11926 461 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TYMPP19971 482 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms