RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 TAS2R1Q9NYW7 299 aa16.07■□□□□ 0.16
LYSMD4-211ENST00000604213 ATP2A1O14983 1001 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 TLR3O15455 904 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 TJP3O95049 919 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 RTN3O95197 1032 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 GLRA2P23416 452 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 SERPINB3P29508 390 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ARFIP2P53365 341 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 VCPP55072 806 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 NOMO3P69849 1222 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 CDK16Q00536 496 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 KRT72Q14CN4 511 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 FAM102BQ5T8I3 360 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ZC3H18Q86VM9 953 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 LRRC6Q86X45 466 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 VPS52Q8N1B4 723 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 DTX3LQ8TDB6 740 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 MCUR1Q96AQ8 359 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 RBM41Q96IZ5 413 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ALG13Q9NP73 1137 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 FBXO6Q9NRD1 293 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 SYNPO2Q9UMS6 1093 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 GOLGA8SH3BPF8 625 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 GOLGA8MH3BSY2 632 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 PIAS1O75925 651 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ATF7P17544 494 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 KCNA3P22001 575 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 NPTX2P47972 431 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 UGCGQ16739 394 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 AOC3Q16853 763 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 KBTBD2Q8IY47 623 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ACER1Q8TDN7 264 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 TSSK1BQ9BXA7 367 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 KRT82Q9NSB4 513 aa16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 MTO1Q9Y2Z2 717 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-211ENST00000604213 DENND3A2RUS2 1198 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 GOLGA8RI6L899 631 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 KRT1P04264 644 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 SSTR1P30872 391 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 RPS6KA3P51812 740 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 GAD2Q05329 585 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ZRSR2Q15696 482 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 HIF1AQ16665 826 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 USP37Q86T82 979 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 FEZF2Q8TBJ5 459 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 NKD2Q969F2 451 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 VCPIP1Q96JH7 1222 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 PAFAH2Q99487 392 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 KLF6Q99612 283 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 PCDH9Q9HC56 1237 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ZNF212Q9UDV6 495 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 MAGEA13PA6NCF6 341 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 RARBP10826 455 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ACO1P21399 889 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 SSTR3P32745 418 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ZBTB16Q05516 673 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 MSS51Q4VC12 460 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ABRAQ8N0Z2 381 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 DCAKDQ8WVC6 231 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 STMN2Q93045 179 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 WDR83Q9BRX9 315 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ACSS3Q9H6R3 686 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 AGO4Q9HCK5 861 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
LYSMD4-211ENST00000604213 MAP3K7O43318 606 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 TGDSO95455 350 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 ITGAVP06756 1048 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 DLDP09622 509 aaKnown RBP16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 PHBP35232 272 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 MCL1Q07820 350 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 FNBP1LQ5T0N5 605 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 TRMT1LQ7Z2T5 733 aaKnown RBP16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 ATP11CQ8NB49 1132 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 PPFIBP2Q8ND30 876 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 PYROXD1Q8WU10 500 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 HAUS1Q96CS2 278 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 FGD4Q96M96 766 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 TMEM121Q9BTD3 319 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 TRIM4Q9C037 500 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 IP6K2Q9UHH9 426 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
LYSMD4-211ENST00000604213 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms