RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 PGLYRP2Q96PD5 576 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 PRKD2Q9BZL6 878 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 CDH9Q9ULB4 789 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 POLIQ9UNA4 740 aa17.14■□□□□ 0.33
PPFIA3-213ENST00000602905 GABRDO14764 452 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 BMP1P13497 986 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 IL9P15248 144 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 FMO5P49326 533 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 NOP14P78316 857 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 PLD1Q13393 1074 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 MAPRE1Q15691 268 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 SPPL2BQ8TCT7 592 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 SUSD6Q92537 303 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 PI4K2AQ9BTU6 479 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 RHOBTB2Q9BYZ6 727 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
PPFIA3-213ENST00000602905 MYH10P35580 1976 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 MTMR11A4FU01 709 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 A8MXQ7 604 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 P4HA2O15460 535 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 CCL16O15467 120 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 AFPP02771 609 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 PDGFRBP09619 1106 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 ALDH1A3P47895 512 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 TUFMP49411 452 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 CBWD6Q4V339 395 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 CBWD3Q5JTY5 395 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 CBWD5Q5RIA9 395 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 FAXDC2Q96IV6 333 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 SMYD3Q9H7B4 428 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 CYP3A43Q9HB55 503 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.336e-6■■■■■ 48.1
PPFIA3-213ENST00000602905 HSFX1Q9UBD0 423 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 PCDHB5Q9Y5E4 795 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 INSL5Q9Y5Q6 135 aa17.12■□□□□ 0.33
PPFIA3-213ENST00000602905 PMM2O15305 246 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 SEC24AO95486 1093 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 POU2F2P09086 479 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 TYRO3Q06418 890 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 DUSP4Q13115 394 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 IQCEQ6IPM2 695 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 SPOPLQ6IQ16 392 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 C4orf50Q6ZRC1 276 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 TTC39CQ8N584 583 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 PHF7Q9BWX1 381 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 COQ4Q9Y3A0 265 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 DOCK6Q96HP0 2047 aa17.11■□□□□ 0.33
PPFIA3-213ENST00000602905 TPM2P07951 284 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 LMO2P25791 158 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 EPHB3P54753 998 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 CDH8P55286 799 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 TWF1Q12792 350 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 VEPH1Q14D04 833 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 LRRTM3Q86VH5 581 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 ATAD1Q8NBU5 361 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 ADAMTS19Q8TE59 1207 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 SEMA4DQ92854 862 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 ZNF512Q96ME7 567 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 MED15Q96RN5 788 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 SEPT5Q99719 369 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 GTF3C4Q9UKN8 822 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
PPFIA3-213ENST00000602905 PAPLNO95428 1278 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 PTPN2P17706 415 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 PSMC1P62191 440 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 YWHAEP62258 255 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 ADHFE1Q8IWW8 467 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 ANKRD20A12PQ8NF67 263 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 423 ms