RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 RASGEF1CQ8N431 466 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 TOP6BLQ8N6T0 577 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 PSMB7Q99436 277 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 MIS12Q9H081 205 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 CARD9Q9H257 536 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 GOLPH3Q9H4A6 298 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 WDR35Q9P2L0 1181 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 CCDC66A2RUB6 948 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 MYO1FO00160 1098 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 O00370 1275 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 DDX3YO15523 660 aaKnown RBP23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 GSCP56915 257 aaPredicted RBP23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 SOX4Q06945 474 aaPredicted RBP23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 MAMLD1Q13495 774 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 BFSP2Q13515 415 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 MTFR1Q15390 333 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 SOWAHAQ2M3V2 549 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 CCDC70Q6NSX1 233 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 DENND1BQ6P3S1 775 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 AGMOQ6ZNB7 445 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 C1orf131Q8NDD1 294 aaKnown RBP23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 GSTCDQ8NEC7 633 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 SPATA4Q8NEY3 305 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 ADAM2Q99965 735 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 TSPYL2Q9H2G4 693 aaPredicted RBP23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 RGS18Q9NS28 235 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 OGDHLQ9ULD0 1010 aa23.62■■□□□ 1.37
PPFIA3-211ENST00000602848 ARL5CA6NH57 179 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 MGEA5O60502 916 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 HUS1O60921 280 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 COMTP21964 271 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 CTNNA2P26232 953 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 LILRA4P59901 499 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 CRYBG2Q8N1P7 616 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 APPL2Q8NEU8 664 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 GAD1Q99259 594 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 MRPL45Q9BRJ2 306 aaKnown RBP23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 HMGXB4Q9UGU5 601 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 ANAPC7Q9UJX3 599 aa23.61■■□□□ 1.37
PPFIA3-211ENST00000602848 INPPL1O15357 1258 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 EOMESO95936 686 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 FEZF2Q8TBJ5 459 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 CD101Q93033 1021 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 DDX27Q96GQ7 796 aaKnown RBP23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 ZFP42Q96MM3 310 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 NAP1L3Q99457 506 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 FTHL17Q9BXU8 183 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 RSAD1Q9HA92 442 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 ARGLU1Q9NWB6 273 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 SCN1AP35498 2009 aa23.6■■□□□ 1.37
PPFIA3-211ENST00000602848 MICAL2O94851 1124 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SETSIPP0DME0 302 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 MLH1P40692 756 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 ARHGAP17Q68EM7 881 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 OR6B3Q8NGW1 331 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 OSBPL7Q9BZF2 842 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SNX25Q9H3E2 840 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 PCDHA3Q9Y5H8 950 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 TCRBV5S1A1TA0A578 114 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 TARSL2A2RTX5 802 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 PGRMC1O00264 195 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SPOPO43791 374 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 CEP104O60308 925 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 PROSCO94903 275 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SELPP16109 830 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 WARSP23381 471 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 MCM3P25205 808 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SSTR3P32745 418 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 MAN1A1P33908 653 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 GNL1P36915 607 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 SNX16P57768 344 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 ZNF268Q14587 947 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 GLE1Q53GS7 698 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 ZNF598Q86UK7 904 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 ECHDC2Q86YB7 292 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 NOA1Q8NC60 698 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 C3orf20Q8ND61 904 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 C18orf8Q96DM3 657 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 CHORDC1Q9UHD1 332 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 IP6K2Q9UHH9 426 aa23.59■■□□□ 1.37
PPFIA3-211ENST00000602848 TMEM110-MUSTN1A8MSY1 372 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 SPTLC1O15269 473 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 COL6A1P12109 1028 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 CCL5P13501 91 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 CTNNA1P35221 906 aaKnown RBP23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 GPD2P43304 727 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 GABRB2P47870 512 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 PEX5P50542 639 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 DNA2P51530 1060 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 FAM189BP81408 668 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 DNAJC24Q6P3W2 148 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 FAM126BQ8IXS8 530 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 RUBCNQ92622 972 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 MS4A14Q96JA4 679 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 UROC1Q96N76 676 aa23.58■■□□□ 1.36
PPFIA3-211ENST00000602848 TMEM191CA6NGB0 347 aa23.57■■□□□ 1.36
PPFIA3-211ENST00000602848 MEIS3P2A8K0S8 358 aa23.57■■□□□ 1.36
PPFIA3-211ENST00000602848 A8MXQ7 604 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms