RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PLXNA3P51805 1871 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 SMTNL1A8MU46 457 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 HNRNPA1P09651 372 aaKnown RBP eCLIP14.84□□□□□ -0.03
RNF40-212ENST00000602784 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 ZNF18P17022 549 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 HOXA9P31269 272 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 ARPP19P56211 112 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 NFE2Q16621 373 aaPredicted RBP14.84□□□□□ -0.03
RNF40-212ENST00000602784 LIN9Q5TKA1 542 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 SPOPLQ6IQ16 392 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 SMRP1Q8NCR6 262 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 EHBP1Q8NDI1 1231 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 LMO3Q8TAP4 145 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 MRPL45Q9BRJ2 306 aaKnown RBP14.84□□□□□ -0.03
RNF40-212ENST00000602784 S1PR5Q9H228 398 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 ADAM7Q9H2U9 754 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 SMYD3Q9H7B4 428 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 PRDM6Q9NQX0 595 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 CDH9Q9ULB4 789 aa14.84□□□□□ -0.03
RNF40-212ENST00000602784 LRRC10BA6NIK2 292 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 H3BQ06 376 aaPredicted RBP14.83□□□□□ -0.04
RNF40-212ENST00000602784 LRRN2O75325 713 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 ZMYND10O75800 440 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 CLSTN1O94985 981 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 POU2F2P09086 479 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 LMO2P25791 158 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 ELF1P32519 619 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 CDH8P55286 799 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 MRPS5P82675 430 aaKnown RBP14.83□□□□□ -0.04
RNF40-212ENST00000602784 ADCY1Q08828 1119 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 INCA1Q0VD86 236 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 MAPRE1Q15691 268 aaKnown RBP14.83□□□□□ -0.04
RNF40-212ENST00000602784 VWA3BQ502W6 1294 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 INTS6LQ5JSJ4 861 aaKnown RBP14.83□□□□□ -0.04
RNF40-212ENST00000602784 MIIPQ5JXC2 388 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 FAM171BQ6P995 826 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 RNF19BQ6ZMZ0 732 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 LRRTM3Q86VH5 581 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 UNC93AQ86WB7 457 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 AOPEPQ8N6M6 819 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 OR6B3Q8NGW1 331 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 TMEM209Q96SK2 561 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 PKMYT1Q99640 499 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 SDCBP2Q9H190 292 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 NDST4Q9H3R1 872 aa14.83□□□□□ -0.04
RNF40-212ENST00000602784 MTMR11A4FU01 709 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 PRRG1O14668 218 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 VNN2O95498 520 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 C8AP07357 584 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 WEE2P0C1S8 567 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 OR4Q2P0C623 313 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
RNF40-212ENST00000602784 TFF2Q03403 129 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
RNF40-212ENST00000602784 IQCB1Q15051 598 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 SLC39A12Q504Y0 691 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 HSP90AA4PQ58FG1 418 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 PPM1LQ5SGD2 360 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 SMYD5Q6GMV2 418 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 CES5AQ6NT32 575 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 GBP6Q6ZN66 633 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 GPR149Q86SP6 731 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 DHX40Q8IX18 779 aaKnown RBP14.82□□□□□ -0.04
RNF40-212ENST00000602784 CRYBG2Q8N1P7 616 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 ANKRD20A12PQ8NF67 263 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 SPPL2BQ8TCT7 592 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 TATDN2Q93075 761 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 ELMO3Q96BJ8 720 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 TNIP3Q96KP6 325 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 NT5C1BQ96P26 610 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 SYT15Q9BQS2 421 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 DNAI2Q9GZS0 605 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 HSD3B7Q9H2F3 369 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 CYP4F11Q9HBI6 524 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 ABCB6Q9NP58 842 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 LIMA1Q9UHB6 759 aaKnown RBP14.82□□□□□ -0.04
RNF40-212ENST00000602784 FAM50BQ9Y247 325 aa14.82□□□□□ -0.04
RNF40-212ENST00000602784 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 A8MXQ7 604 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 SEC24AO95486 1093 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 TPM2P07951 284 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 PDGFRBP09619 1106 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 PTPN1P18031 435 aaKnown RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 ACAT1P24752 427 aaKnown RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 RAP1GAPP47736 663 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 TUFMP49411 452 aaKnown RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 DUSP4Q13115 394 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 CUL2Q13617 745 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 KRT31Q15323 416 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 EXOC3L4Q17RC7 722 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 C12orf76Q8N812 135 aaPredicted RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 ATAD1Q8NBU5 361 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.81□□□□□ -0.04
RNF40-212ENST00000602784 SLC7A14Q8TBB6 771 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 MYCBPAPQ8TBZ2 947 aa14.81□□□□□ -0.04
RNF40-212ENST00000602784 SUSD6Q92537 303 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms