RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TACC1O75410 805 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ASGR2P07307 311 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 FAM163BP0C2L3 166 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 KRT13P13646 458 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 WARSP23381 471 aaKnown RBP17.93■□□□□ 0.46
SSBP4-213ENST00000602088 CCNE1P24864 410 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 PCSK1P29120 753 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 PPP1R2P41236 205 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ALDH1A3P47895 512 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 CDR1P51861 262 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 LRRC63Q05C16 580 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 PLD1Q13393 1074 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 NCOA4Q13772 614 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 CAMK4Q16566 473 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 IQCEQ6IPM2 695 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 SV2AQ7L0J3 742 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ZC3H3Q8IXZ2 948 aaKnown RBP17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ELMOD1Q8N336 334 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 SPPL2BQ8TCT7 592 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 EDAQ92838 391 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 PKMYT1Q99640 499 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 TMLHEQ9NVH6 421 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 ZFP37Q9Y6Q3 630 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-213ENST00000602088 TRIM49BA6NDI0 452 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 PPP1R3GB7ZBB8 358 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 GPR37L1O60883 481 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 ACAT1P24752 427 aaKnown RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 LMO2P25791 158 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 TUFMP49411 452 aaKnown RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 EPHB3P54753 998 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 TNNC1P63316 161 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 ZXDAP98168 799 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 FKBP3Q00688 224 aaKnown RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 NFE2Q16621 373 aaPredicted RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 INTS6LQ5JSJ4 861 aaKnown RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 FGF13Q92913 245 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 DNAJC25Q9H1X3 360 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 KCNK12Q9HB15 430 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 C11orf16Q9NQ32 467 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 KIAA1468Q9P260 1216 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 IGSF9Q9P2J2 1179 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 GTF3C4Q9UKN8 822 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 CDH7Q9ULB5 785 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 SORCS3Q9UPU3 1222 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 MRPS23Q9Y3D9 190 aaKnown RBP17.92■□□□□ 0.46
SSBP4-213ENST00000602088 PCDHB5Q9Y5E4 795 aa17.92■□□□□ 0.46
SSBP4-213ENST00000602088 HCRTO43612 131 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 SOAT2O75908 522 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 TRIM49P0CI25 452 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 TRIM49CP0CI26 452 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 HAPLN1P10915 354 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-213ENST00000602088 EPB41P11171 864 aaKnown RBP17.91■□□□□ 0.46
SSBP4-213ENST00000602088 GCLMP48507 274 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 EPHA5P54756 1037 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 PPP3CAQ08209 521 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 SLC5A9Q2M3M2 681 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 SGSM1Q2NKQ1 1148 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 ZNF699Q32M78 642 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 PRSS36Q5K4E3 855 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 HS6ST3Q8IZP7 471 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 TAF4BQ92750 862 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 SEPT5Q99719 369 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-213ENST00000602088 MRPL45Q9BRJ2 306 aaKnown RBP17.91■□□□□ 0.46
SSBP4-213ENST00000602088 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 NXF1Q9UBU9 619 aaKnown RBP17.91■□□□□ 0.46
SSBP4-213ENST00000602088 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
SSBP4-213ENST00000602088 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ZNF197O14709 1029 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 SLC16A3O15427 465 aaKnown RBP17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ATP2C2O75185 946 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 MICAL2O94851 1124 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 HLA-DRAP01903 254 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 PDGFRBP09619 1106 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 GNL1P36915 607 aaPredicted RBP17.9■□□□□ 0.46
SSBP4-213ENST00000602088 CCR2P41597 374 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 CCDC142Q17RM4 750 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 MGAT5BQ3V5L5 792 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ZNF667Q5HYK9 610 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 TMEM31Q5JXX7 168 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 CYP4A22Q5TCH4 519 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 FAM171BQ6P995 826 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 FOXR2Q6PJQ5 311 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 NPAS3Q8IXF0 933 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 TRIML1Q8N9V2 468 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 LEMD2Q8NC56 503 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 PSMG2Q969U7 264 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ELMO3Q96BJ8 720 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 TCEAL4Q96EI5 215 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 SYT15Q9BQS2 421 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 LRRC3Q9BY71 257 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 SNX25Q9H3E2 840 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ABI2Q9NYB9 513 aaPredicted RBP17.9■□□□□ 0.46
SSBP4-213ENST00000602088 CDH9Q9ULB4 789 aa17.9■□□□□ 0.46
SSBP4-213ENST00000602088 ANHXE9PGG2 379 aa17.89■□□□□ 0.45
SSBP4-213ENST00000602088 ASS1P00966 412 aaKnown RBP17.89■□□□□ 0.45
SSBP4-213ENST00000602088 CEBPBP17676 345 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms