RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	KIF9	Q9HAQ2	790 aa		13.34	□□□□□ -0.27
NUP62-223	ENST00000601665	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.34	□□□□□ -0.27
NUP62-223	ENST00000601665	RBM19	Q9Y4C8	960 aa	Known RBP	13.34	□□□□□ -0.27
NUP62-223	ENST00000601665	EML5	Q05BV3	1969 aa		13.34	□□□□□ -0.27
NUP62-223	ENST00000601665	CIT	O14578	2027 aa		13.34	□□□□□ -0.27
NUP62-223	ENST00000601665	SPAAR	A0A1B0GVQ0	90 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	OTOL1	A6NHN0	477 aa	Predicted RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	MEFV	O15553	781 aa	Predicted RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	XPOT	O43592	962 aa	Known RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	LARGE1	O95461	756 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	ODC1	P11926	461 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	ARSA	P15289	507 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	GJA4	P35212	333 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	SPAG1	Q07617	926 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	SLC10A6	Q3KNW5	377 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	SEZ6	Q53EL9	994 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	C19orf48	Q6RUI8	117 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	DIS3L2	Q8IYB7	885 aa	Known RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	HDDC3	Q8N4P3	179 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	MAB21L3	Q8N8X9	362 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	GIPC2	Q8TF65	315 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	CD101	Q93033	1021 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	TNFRSF25	Q93038	417 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	TMEM60	Q9H2L4	133 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	TDP1	Q9NUW8	608 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	HSFX1	Q9UBD0	423 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	UBQLN1	Q9UMX0	589 aa	Known RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	CCL26	Q9Y258	94 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	ASCC3	Q8N3C0	2202 aa	Known RBP	13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	ABCA7	Q8IZY2	2146 aa		13.33	□□□□□ -0.28
NUP62-223	ENST00000601665	NUP205	Q92621	2012 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	BTBD18	B2RXH4	712 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	TOM1L1	O75674	476 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	ALDH1A2	O94788	518 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	CXCL8	P10145	99 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	TYMP	P19971	482 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	PROZ	P22891	400 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	DDX6	P26196	483 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	6e-6	■■■■□ 19.3
NUP62-223	ENST00000601665	CDR1	P51861	262 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	FOSB	P53539	338 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	PPP2R3A	Q06190	1150 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	SLC39A12	Q504Y0	691 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	LPCAT2	Q7L5N7	544 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	PROSER1	Q86XN7	944 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	MRPS31	Q92665	395 aa	Known RBP	13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	USP13	Q92995	863 aa	Predicted RBP	13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	SPACA7	Q96KW9	195 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	DRC1	Q96MC2	740 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	EVL	Q9UI08	416 aa	Predicted RBP	13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	KIAA1024	Q9UPX6	916 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	LAMA5	O15230	3695 aa		13.32	□□□□□ -0.28
NUP62-223	ENST00000601665	HELZ2	Q9BYK8	2649 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	WNT7A	O00755	349 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	CLDN3	O15551	220 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	OR52Z1	P0C646	297 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	CYP3A5	P20815	502 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	MUT	P22033	750 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	NMT1	P30419	496 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	LRPAP1	P30533	357 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	IFNAR2	P48551	515 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	NR1H3	Q13133	447 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	NAIF1	Q69YI7	327 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	ARMCX6	Q7L4S7	300 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	PDZD3	Q86UT5	571 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	ATP2A3	Q93084	1043 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	ZBTB45	Q96K62	511 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	TM6SF1	Q9BZW5	370 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	ECT2	Q9H8V3	914 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	PLEKHA5	Q9HAU0	1116 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	IL21	Q9HBE4	155 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	DUS2	Q9NX74	493 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	ARHGAP28	Q9P2N2	729 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	SMG1	Q96Q15	3661 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	THADA	Q6YHU6	1953 aa		13.31	□□□□□ -0.28
NUP62-223	ENST00000601665	SLC16A4	O15374	487 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	PFKFB2	O60825	505 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	HIP1R	O75146	1068 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	CFI	P05156	583 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	CLTA	P09496	248 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	ENG	P17813	658 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	ATF6	P18850	670 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	BCKDHB	P21953	392 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	DPP6	P42658	865 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	AARS	P49588	968 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SMTN	P53814	917 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SEC13	P55735	322 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	MTF1	Q14872	753 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SAFB	Q15424	915 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	C2orf27A	Q580R0	203 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	TXNDC8	Q6A555	127 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	METTL23	Q86XA0	190 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SYT12	Q8IV01	421 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	THEM5	Q8N1Q8	247 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	CHCHD4	Q8N4Q1	142 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	BICD1	Q96G01	975 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	SENP8	Q96LD8	212 aa		13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	CNOT6L	Q96LI5	555 aa	Known RBP	13.3	□□□□□ -0.28
NUP62-223	ENST00000601665	GTPBP2	Q9BX10	602 aa	Known RBP	13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms