RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 F5P12259 2224 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 PATJQ8NI35 1801 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 TMEM221A6NGB7 291 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 M0R296 226 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 PMM2O15305 246 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 HCRTO43612 131 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 SMC2O95347 1197 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ASS1P00966 412 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 TNNC2P02585 160 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ASGR2P07307 311 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 RHOP08100 348 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 CPB1P15086 417 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 PTPN2P17706 415 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ATF6P18850 670 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 TNNI1P19237 187 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 CCNE1P24864 410 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 LMO2P25791 158 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 MYL6P60660 151 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 LRRC63Q05C16 580 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 PPP3CAQ08209 521 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 DUSP4Q13115 394 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ADAM9Q13443 819 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 MTMR3Q13615 1198 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 PABPC1LQ4VXU2 614 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 SLC39A12Q504Y0 691 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 INTS6LQ5JSJ4 861 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ANKRD40Q6AI12 368 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 TTI2Q6NXR4 508 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 NPAS3Q8IXF0 933 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 SPPL2BQ8TCT7 592 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 FGF13Q92913 245 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 PSMG2Q969U7 264 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 FUBP3Q96I24 572 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 MED15Q96RN5 788 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 DUSP9Q99956 384 aaKnown RBP9.43□□□□□ -0.9
SSBP4-208ENST00000600628 TRPV4Q9HBA0 871 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 CRTAC1Q9NQ79 661 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 LMBRD1Q9NUN5 540 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 GDE1Q9NZC3 331 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 IGSF9Q9P2J2 1179 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 RAPGEFL1Q9UHV5 662 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 COQ4Q9Y3A0 265 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 SNX9Q9Y5X1 595 aa9.43□□□□□ -0.9
SSBP4-208ENST00000600628 KINO60870 393 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 HUS1O60921 280 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 HAPLN1P10915 354 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 HMGA1P17096 107 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 FSHRP23945 695 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 FCARP24071 287 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 RPL13P26373 211 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 WEE1P30291 646 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 GBP2P32456 591 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 ELF1P32519 619 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 GTF2H1P32780 548 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 MAGEA11P43364 429 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TUFMP49411 452 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 ARPP19P56211 112 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TWF1Q12792 350 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 BFSP1Q12934 665 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 NFE2Q16621 373 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 CCDC142Q17RM4 750 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 GAREM2Q75VX8 874 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TMEM150AQ86TG1 271 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 METTL23Q86XA0 190 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 ADGRF2Q8IZF7 708 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TRIML1Q8N9V2 468 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 LEMD2Q8NC56 503 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TAF4BQ92750 862 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 SYAP1Q96A49 352 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 TCEAL4Q96EI5 215 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 DHTKD1Q96HY7 919 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 FAXDC2Q96IV6 333 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 CEP295NLQ96MC4 621 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 DDX43Q9NXZ2 648 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 KIAA1468Q9P260 1216 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 HOOK1Q9UJC3 728 aaKnown RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 DUSP12Q9UNI6 340 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
SSBP4-208ENST00000600628 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-208ENST00000600628 MYBPHLA2RUH7 354 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 TRIM49BA6NDI0 452 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 PRRG1O14668 218 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 SLC16A3O15427 465 aaKnown RBP9.41□□□□□ -0.9
SSBP4-208ENST00000600628 LRG1P02750 347 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 KRT19P08727 400 aa9.41□□□□□ -0.9
SSBP4-208ENST00000600628 PCSK1P29120 753 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms