RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	XYLT2	Q9H1B5	865 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523	HSFX1	Q9UBD0	423 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523	PRKAG3	Q9UGI9	489 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523	CDH9	Q9ULB4	789 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523	NR2E1	Q9Y466	385 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523	PCDHB5	Q9Y5E4	795 aa		13.92	□□□□□ -0.18
SRRM1-223	ENST00000600523		A8MXQ7	604 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	VNN1	O95497	513 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	AFP	P02771	609 aa	Known RBP	13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	FMO5	P49326	533 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	EPHB3	P54753	998 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	MCCD1	P59942	119 aa	Predicted RBP	13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	YWHAE	P62258	255 aa	Known RBP	13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	VEPH1	Q14D04	833 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	TAF12	Q16514	161 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	C1orf220	Q5T0J3	134 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	RNF19B	Q6ZMZ0	732 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	TRIM59	Q8IWR1	403 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	FAM200A	Q8TCP9	573 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	CNOT6L	Q96LI5	555 aa	Known RBP	13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	PGLYRP2	Q96PD5	576 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	SYT15	Q9BQS2	421 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	NIF3L1	Q9GZT8	377 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	S1PR5	Q9H228	398 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	CYP3A43	Q9HB55	503 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	TMEM63C	Q9P1W3	806 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	VWA8	A3KMH1	1905 aa		13.91	□□□□□ -0.18
SRRM1-223	ENST00000600523	SCN1A	P35498	2009 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	GABRD	O14764	452 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	RFPL2	O75678	378 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	POU2F2	P09086	479 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	OR4Q2	P0C623	313 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	TYRO3	Q06418	890 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	KCNH2	Q12809	1159 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	DUSP4	Q13115	394 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	MGAT5B	Q3V5L5	792 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	INTS6L	Q5JSJ4	861 aa	Known RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	SCARA5	Q6ZMJ2	495 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ITIH5	Q86UX2	942 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	OR10T2	Q8NGX3	314 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ENOX1	Q8TC92	643 aa	Known RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ACSF2	Q96CM8	615 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ZNF512	Q96ME7	567 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	SEPT5	Q99719	369 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	PHF7	Q9BWX1	381 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ABCB6	Q9NP58	842 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ABI2	Q9NYB9	513 aa	Predicted RBP	13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	INSL5	Q9Y5Q6	135 aa		13.9	□□□□□ -0.18
SRRM1-223	ENST00000600523	ATP8B3	O60423	1300 aa		13.9	□□□□□ -0.19
SRRM1-223	ENST00000600523	MTMR11	A4FU01	709 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	PES1	O00541	588 aa	Known RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	PMM2	O15305	246 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	CCL16	O15467	120 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	PDGFRB	P09619	1106 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	BMP1	P13497	986 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	IL9	P15248	144 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	PTPN2	P17706	415 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	TBXAS1	P24557	533 aa	Predicted RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	ACAT1	P24752	427 aa	Known RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	EEF1G	P26641	437 aa	Known RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	SSTR3	P32745	418 aa	Predicted RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	RPL10A	P62906	217 aa	Known RBP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	MYL5	Q02045	173 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	CBWD6	Q4V339	395 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	CBWD3	Q5JTY5	395 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	CBWD5	Q5RIA9	395 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	CYP4A22	Q5TCH4	519 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	LIMS2	Q7Z4I7	341 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	UNC93A	Q86WB7	457 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	ADHFE1	Q8IWW8	467 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	LEMD2	Q8NC56	503 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	ADAMTS19	Q8TE59	1207 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	KBTBD7	Q8WVZ9	684 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	SUSD6	Q92537	303 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	FAM81B	Q96LP2	452 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	PI4K2A	Q9BTU6	479 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	SMYD3	Q9H7B4	428 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	2e-6	■■■■■ 60.6
SRRM1-223	ENST00000600523	COQ4	Q9Y3A0	265 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	NFE2L3	Q9Y4A8	694 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	ASB3	Q9Y575	518 aa		13.89	□□□□□ -0.19
SRRM1-223	ENST00000600523	FGF19	O95750	216 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	CDK11B	P21127	795 aa	Known RBP	13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	CYP27A1	Q02318	531 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	TWF1	Q12792	350 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	MAN2A1	Q16706	1144 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	SCARA3	Q6AZY7	606 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	OTOP3	Q7RTS5	596 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	ATAD1	Q8NBU5	361 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	B3GALNT2	Q8NCR0	500 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	NT5C1B	Q96P26	610 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	TMEM209	Q96SK2	561 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	UHRF1	Q96T88	793 aa	Predicted RBP	13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	RTP3	Q9BQQ7	232 aa		13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	MRPL45	Q9BRJ2	306 aa	Known RBP	13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	WDR6	Q9NNW5	1121 aa	Known RBP	13.88	□□□□□ -0.19
SRRM1-223	ENST00000600523	EHD2	Q9NZN4	543 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms