RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 OBP2AQ9NY56 170 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 HSPBP1Q9NZL4 362 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 ZMYM5Q9UJ78 669 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 RCOR1Q9UKL0 485 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 MTF2Q9Y483 593 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 PCDHB5Q9Y5E4 795 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 PVALEFA0A1B0GWK0 134 aa17■□□□□ 0.31
VRK3-221ENST00000600284 HEPACAM2A8MVW5 462 aa17■□□□□ 0.31
VRK3-221ENST00000600284 ZNF263O14978 683 aa17■□□□□ 0.31
VRK3-221ENST00000600284 SOAT2O75908 522 aa17■□□□□ 0.31
VRK3-221ENST00000600284 GABRR2P28476 465 aa17■□□□□ 0.31
VRK3-221ENST00000600284 CDC25CP30307 473 aa17■□□□□ 0.31
VRK3-221ENST00000600284 GDI1P31150 447 aa17■□□□□ 0.31
VRK3-221ENST00000600284 VIPR2P41587 438 aa17■□□□□ 0.31
VRK3-221ENST00000600284 RPS9P46781 194 aaKnown RBP17■□□□□ 0.31
VRK3-221ENST00000600284 MYO1EQ12965 1108 aa17■□□□□ 0.31
VRK3-221ENST00000600284 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
VRK3-221ENST00000600284 ARHGAP15Q53QZ3 475 aa17■□□□□ 0.31
VRK3-221ENST00000600284 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
VRK3-221ENST00000600284 TOP6BLQ8N6T0 577 aa17■□□□□ 0.31
VRK3-221ENST00000600284 FAM200AQ8TCP9 573 aa17■□□□□ 0.31
VRK3-221ENST00000600284 NOC3LQ8WTT2 800 aaKnown RBP17■□□□□ 0.31
VRK3-221ENST00000600284 LEO1Q8WVC0 666 aaPredicted RBP17■□□□□ 0.31
VRK3-221ENST00000600284 HPS3Q969F9 1004 aa17■□□□□ 0.31
VRK3-221ENST00000600284 ATXN3LQ9H3M9 355 aa17■□□□□ 0.31
VRK3-221ENST00000600284 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
VRK3-221ENST00000600284 SIX4Q9UIU6 781 aa17■□□□□ 0.31
VRK3-221ENST00000600284 L1RE1Q9UN81 338 aa17■□□□□ 0.31
VRK3-221ENST00000600284 TSC2P49815 1807 aa17■□□□□ 0.31
VRK3-221ENST00000600284 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 CHADO15335 359 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 LRRN2O75325 713 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 TNNC2P02585 160 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 KRT19P08727 400 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 SP9P0CG40 484 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ATF6P18850 670 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 CD72P21854 359 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 LHX1P48742 406 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 MYL7Q01449 175 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 FCHO2Q0JRZ9 810 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 BFSP1Q12934 665 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 TAF12Q16514 161 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ZNF528Q3MIS6 628 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 FOXD4L6Q3SYB3 417 aaPredicted RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ZC3H14Q6PJT7 736 aaKnown RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 FOXD4L3Q6VB84 417 aaPredicted RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 WDR49Q8IV35 697 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ARID3BQ8IVW6 561 aaPredicted RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 MKNK1Q9BUB5 465 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 MTMR12Q9C0I1 747 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
VRK3-221ENST00000600284 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 MYO15AQ9UKN7 3530 aa16.99■□□□□ 0.31
VRK3-221ENST00000600284 ZFHX2Q9C0A1 2572 aaPredicted RBP16.98■□□□□ 0.31
VRK3-221ENST00000600284 SHISA7A6NL88 538 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 SOBPA7XYQ1 873 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 DPYSL4O14531 572 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 GABRDO14764 452 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 TGFB1I1O43294 461 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 TARSP26639 723 aaKnown RBP16.98■□□□□ 0.31
VRK3-221ENST00000600284 DNM1Q05193 864 aaKnown RBP16.98■□□□□ 0.31
VRK3-221ENST00000600284 PKP1Q13835 747 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 BMT2Q1RMZ1 405 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 LIMS2Q7Z4I7 341 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 CBWD2Q8IUF1 395 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 YAF2Q8IY57 180 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 MSANTD3Q96H12 275 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 GCNAQ96QF7 691 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 TASP1Q9H6P5 420 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 IL21Q9HBE4 155 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 AGPAT3Q9NRZ7 376 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 DDX43Q9NXZ2 648 aaKnown RBP16.98■□□□□ 0.31
VRK3-221ENST00000600284 SNX9Q9Y5X1 595 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 DMDP11532 3685 aa16.98■□□□□ 0.31
VRK3-221ENST00000600284 ARNTLO00327 626 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 LAMTOR5O43504 91 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
VRK3-221ENST00000600284 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 PCSK1P29120 753 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
VRK3-221ENST00000600284 FZD5Q13467 585 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 SNRNP35Q16560 246 aaKnown RBP16.97■□□□□ 0.31
VRK3-221ENST00000600284 SOWAHAQ2M3V2 549 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 INTS6LQ5JSJ4 861 aaKnown RBP16.97■□□□□ 0.31
VRK3-221ENST00000600284 STXBP5Q5T5C0 1151 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 GPR158Q5T848 1215 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 C12orf56Q8IXR9 622 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 MAML2Q8IZL2 1156 aaPredicted RBP16.97■□□□□ 0.31
VRK3-221ENST00000600284 ZNF687Q8N1G0 1237 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 XXYLT1Q8NBI6 393 aa16.97■□□□□ 0.31
VRK3-221ENST00000600284 OR5B17Q8NGF7 314 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms