RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 CLSTN3Q9BQT9 956 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 NUP58Q9BVL2 599 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 NT5C1AQ9BXI3 368 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 TLE6Q9H808 572 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 PCDHB4Q9Y5E5 795 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 LAMA3Q16787 3333 aa20.29■□□□□ 0.84
COPE-209ENST00000599964 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 HIDE1A8MVS5 230 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 CILPO75339 1184 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 C1RP00736 705 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 PDGFRBP09619 1106 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 RPL17P18621 184 aaKnown RBP20.28■□□□□ 0.84
COPE-209ENST00000599964 KLK7P49862 253 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 ARPP19P56211 112 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 RAPGEF1Q13905 1077 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 RAB33AQ14088 237 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 INTS6LQ5JSJ4 861 aaKnown RBP20.28■□□□□ 0.84
COPE-209ENST00000599964 GJB7Q6PEY0 223 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 ELMSAN1Q6PJG2 1045 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 CACNA2D4Q7Z3S7 1137 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 OSTM1Q86WC4 334 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 KREMEN1Q96MU8 473 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 ZCWPW1Q9H0M4 648 aa20.28■□□□□ 0.84
COPE-209ENST00000599964 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.84
COPE-209ENST00000599964 LMO2P25791 158 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 POLR2FP61218 127 aaKnown RBP20.27■□□□□ 0.84
COPE-209ENST00000599964 APBA1Q02410 837 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 NFE2Q16621 373 aaPredicted RBP20.27■□□□□ 0.84
COPE-209ENST00000599964 TPGS2Q68CL5 300 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 IQCEQ6IPM2 695 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 FMNL3Q8IVF7 1028 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 GLYCTKQ8IVS8 523 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 OR10T2Q8NGX3 314 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 KAT5Q92993 513 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 SPAG5Q96R06 1193 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 RTP3Q9BQQ7 232 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 STK33Q9BYT3 514 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 GANQ9H2C0 597 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 CEP72Q9P209 647 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 DPP7Q9UHL4 492 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 MAFFQ9ULX9 164 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 PCDHGC5Q9Y5F6 944 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.27■□□□□ 0.84
COPE-209ENST00000599964 FHOD1Q9Y613 1164 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 MTCH2Q9Y6C9 303 aa20.27■□□□□ 0.84
COPE-209ENST00000599964 GLUD1P00367 558 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 KRT5P13647 590 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 PTPN1P18031 435 aaKnown RBP20.26■□□□□ 0.83
COPE-209ENST00000599964 PBX1P40424 430 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 ROR1Q01973 937 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 GPR17Q13304 367 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 FIGNQ5HY92 759 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 DPY19L2P1Q6NXN4 242 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 TMEM270Q6UE05 265 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 C4orf50Q6ZRC1 276 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 Q7L0L9 218 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 CRYBG2Q8N1P7 616 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 ZNF461Q8TAF7 563 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 C2orf15Q8WU43 125 aaKnown RBP20.26■□□□□ 0.83
COPE-209ENST00000599964 SHC3Q92529 594 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 TMEM176AQ96HP8 235 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 EDEM3Q9BZQ6 932 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 KIAA1257Q9ULG3 409 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 CHD7Q9P2D1 2997 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 ITIH6Q6UXX5 1313 aa20.26■□□□□ 0.83
COPE-209ENST00000599964 NOL4O94818 638 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 PAEPP09466 180 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 SRGAP2BP0DMP2 458 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 ACO1P21399 889 aaKnown RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 ELF1P32519 619 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 USP8P40818 1118 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 NRIP1P48552 1158 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 ADGRE1Q14246 886 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 DRAP1Q14919 205 aaPredicted RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 DUSP6Q16828 381 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 SLC39A12Q504Y0 691 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 ZNF394Q53GI3 561 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 SPECC1LQ69YQ0 1117 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 RSPO2Q6UXX9 243 aaPredicted RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 ACOT1Q86TX2 421 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 RBM23Q86U06 439 aaKnown RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 PALB2Q86YC2 1186 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 UBR7Q8N806 425 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 RBBP8NLQ8NC74 664 aaPredicted RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 HEXIM2Q96MH2 286 aaKnown RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 CDX2Q99626 313 aaPredicted RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 NAA15Q9BXJ9 866 aaKnown RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 NLRC4Q9NPP4 1024 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 AFF4Q9UHB7 1163 aaKnown RBP20.25■□□□□ 0.83
COPE-209ENST00000599964 GTF3C4Q9UKN8 822 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 CNTN6Q9UQ52 1028 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 ATP8B3O60423 1300 aa20.25■□□□□ 0.83
COPE-209ENST00000599964 TRANK1O15050 2925 aa20.24■□□□□ 0.83
COPE-209ENST00000599964 NCK2O43639 380 aa20.24■□□□□ 0.83
COPE-209ENST00000599964 CLASP2O75122 1294 aaKnown RBP20.24■□□□□ 0.83
COPE-209ENST00000599964 TPM1P09493 284 aa20.24■□□□□ 0.83
COPE-209ENST00000599964 OR4Q2P0C623 313 aa20.24■□□□□ 0.83
COPE-209ENST00000599964 ZNF75DP51815 510 aa20.24■□□□□ 0.83
COPE-209ENST00000599964 BPIFB4P59827 614 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms