RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 GPD1P21695 349 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 GTF2H1P32780 548 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RCN1Q15293 331 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 MTERF3Q96E29 417 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 LSM7Q9UK45 103 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 CDY2AQ9Y6F7 541 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SKAP2O75563 359 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 GEMIN4P57678 1058 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ALDH6A1Q02252 535 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 LRRC34Q8IZ02 419 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 FAM111AQ96PZ2 611 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ECSITQ9BQ95 431 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ROPN1BQ9BZX4 212 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ROPN1Q9HAT0 212 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RIC8BQ9NVN3 520 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ZFYVE16Q7Z3T8 1539 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 CYP27B1O15528 508 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RGS5O15539 181 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 TOMM70O94826 608 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 COPAP53621 1224 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 NME5P56597 212 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 POU4F1Q01851 419 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SPASTQ9UBP0 616 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 HERC5Q9UII4 1024 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 DISP1Q96F81 1524 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ASB14A6NK59 587 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 EVPLLA8MZ36 301 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 TRIM49D1C9J1S8 452 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 HNRNPH1P31943 449 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 GPR63Q9BZJ6 419 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 FAM129AQ9BZQ8 928 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 CCSER1Q9C0I3 900 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ALDH8A1Q9H2A2 487 aaPredicted RBP12.33□□□□□ -0.44
SCN8A-208ENST00000599343 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
SCN8A-208ENST00000599343 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 UPP2O95045 317 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 EMC2Q15006 297 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 PDK1Q15118 436 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 STILQ15468 1287 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 SMNDC1O75940 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 TFE3P19532 575 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 RGS4P49798 205 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 PPIL6Q8IXY8 311 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 CALML6Q8TD86 181 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 RSPH10B2B2RC85 870 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 DGAT1O75907 488 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 GYPCP04921 128 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 RSPH10BP0C881 870 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 MLNP12872 115 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 KHDRBS2Q5VWX1 349 aaKnown RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 PGBD3Q8N328 593 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 ZNF512Q96ME7 567 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 RBBP8Q99708 897 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 THUMPD3Q9BV44 507 aaKnown RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 PSMD14O00487 310 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 HSD17B3P37058 310 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
SCN8A-208ENST00000599343 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 FGD2Q7Z6J4 655 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
SCN8A-208ENST00000599343 NCF1BA6NI72 391 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 NCF1CA8MVU1 366 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 KIAA0391O15091 583 aaKnown RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 NCF1P14598 390 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 MRPS35P82673 323 aaKnown RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 FOXO4P98177 505 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 XKR3Q5GH77 459 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
SCN8A-208ENST00000599343 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 DOLKQ9UPQ8 538 aa12.31□□□□□ -0.44
SCN8A-208ENST00000599343 CDHR2Q9BYE9 1310 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms