RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ZFP14Q9HCL3 533 aa15.71■□□□□ 0.11
XRCC1-208ENST00000598422 PCDHB5Q9Y5E4 795 aa15.71■□□□□ 0.11
XRCC1-208ENST00000598422 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
XRCC1-208ENST00000598422 ZDBF2Q9HCK1 2354 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 A0A1W2PRU2 124 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 KRBA1A5PL33 1030 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 PHACTR2O75167 634 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 FGF19O95750 216 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 GJA1P17302 382 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 AOC1P19801 751 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 LHX1P48742 406 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 TRPC3Q13507 836 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 TEAD2Q15562 447 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 ARHGAP15Q53QZ3 475 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
XRCC1-208ENST00000598422 FAM78AQ5JUQ0 283 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 KRBA2Q6ZNG9 492 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 DNAJB7Q7Z6W7 309 aaPredicted RBP15.7■□□□□ 0.1
XRCC1-208ENST00000598422 CXorf38Q8TB03 319 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 SHKBP1Q8TBC3 707 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 ZSCAN18Q8TBC5 510 aaPredicted RBP15.7■□□□□ 0.1
XRCC1-208ENST00000598422 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 PSMG2Q969U7 264 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 ELSPBP1Q96BH3 223 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 LPIN3Q9BQK8 851 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 GPR88Q9GZN0 384 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 ATXN3LQ9H3M9 355 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 GOLPH3LQ9H4A5 285 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 MUC6Q6W4X9 2439 aa15.7■□□□□ 0.1
XRCC1-208ENST00000598422 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
XRCC1-208ENST00000598422 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 HAPLN1P10915 354 aaPredicted RBP15.69■□□□□ 0.1
XRCC1-208ENST00000598422 NPR3P17342 541 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 ACAT1P24752 427 aaKnown RBP15.69■□□□□ 0.1
XRCC1-208ENST00000598422 GABRR2P28476 465 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 BIRC3Q13489 604 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 TANGO2Q6ICL3 276 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 LRRTM3Q86VH5 581 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 TMC8Q8IU68 726 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 ASB16Q96NS5 453 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 MMS19Q96T76 1030 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
XRCC1-208ENST00000598422 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
XRCC1-208ENST00000598422 ZNF202O95125 648 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 NR3C1P04150 777 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 ATF6P18850 670 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 CDC25CP30307 473 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 TNNC1P63316 161 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 TCF15Q12870 199 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 SNW1Q13573 536 aaKnown RBP15.68■□□□□ 0.1
XRCC1-208ENST00000598422 MLF2Q15773 248 aaPredicted RBP15.68■□□□□ 0.1
XRCC1-208ENST00000598422 SOWAHAQ2M3V2 549 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 OSTM1Q86WC4 334 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 SPATA2LQ8IUW3 424 aaPredicted RBP15.68■□□□□ 0.1
XRCC1-208ENST00000598422 GIPC2Q8TF65 315 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 BRD9Q9H8M2 597 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 ABCB6Q9NP58 842 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
XRCC1-208ENST00000598422 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
XRCC1-208ENST00000598422 PDXKO00764 312 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 MOSPD3O75425 235 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 RHOBTB3O94955 611 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 FCARP24071 287 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 CASP4P49662 377 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 AP3M2P53677 418 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 RPL10AP62906 217 aaKnown RBP15.67■□□□□ 0.1
XRCC1-208ENST00000598422 PRKCQQ04759 706 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 DPYDQ12882 1025 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 GRM2Q14416 872 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 GPR158Q5T848 1215 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 CEP135Q66GS9 1140 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 SCARA3Q6AZY7 606 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 PHLDB3Q6NSJ2 640 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 SLC9A9Q8IVB4 645 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 YAF2Q8IY57 180 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 DEPDC1BQ8WUY9 529 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 E2F7Q96AV8 911 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 ZSWIM3Q96MP5 696 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 SYT15Q9BQS2 421 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
XRCC1-208ENST00000598422 LRRC3Q9BY71 257 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 KCTD10Q9H3F6 313 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 ZNF334Q9HCZ1 680 aaPredicted RBP15.67■□□□□ 0.1
XRCC1-208ENST00000598422 TMLHEQ9NVH6 421 aa15.67■□□□□ 0.1
XRCC1-208ENST00000598422 NRG2O14511 850 aaPredicted RBP15.66■□□□□ 0.1
XRCC1-208ENST00000598422 DPYSL4O14531 572 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 GABRDO14764 452 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 PI15O43692 258 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 PSMC3P17980 439 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 WARSP23381 471 aaKnown RBP15.66■□□□□ 0.1
XRCC1-208ENST00000598422 VIPR2P41587 438 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 PSMC1P62191 440 aaKnown RBP15.66■□□□□ 0.1
XRCC1-208ENST00000598422 KCNB1Q14721 858 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 MAPRE1Q15691 268 aaKnown RBP15.66■□□□□ 0.1
XRCC1-208ENST00000598422 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 SLC44A4Q53GD3 710 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 C4orf50Q6ZRC1 276 aa15.66■□□□□ 0.1
XRCC1-208ENST00000598422 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms