RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 MAPK13O15264 365 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 ECI2O75521 394 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 FGF19O95750 216 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 STAU1O95793 577 aaKnown RBP17.88■□□□□ 0.45
USHBP1-208ENST00000598309 PDGFBP01127 241 aaPredicted RBP17.88■□□□□ 0.45
USHBP1-208ENST00000598309 VEPH1Q14D04 833 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 OSTM1Q86WC4 334 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 TMC8Q8IU68 726 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 HS6ST3Q8IZP7 471 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 PARD3BQ8TEW8 1205 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 TCEAL4Q96EI5 215 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 TIGD1Q96MW7 591 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 SEPT5Q99719 369 aaPredicted RBP17.88■□□□□ 0.45
USHBP1-208ENST00000598309 LRRC3Q9BY71 257 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 ABCB6Q9NP58 842 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 RMND1Q9NWS8 449 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 FBXL21Q9UKT6 434 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 PCDHB5Q9Y5E4 795 aa17.88■□□□□ 0.45
USHBP1-208ENST00000598309 MOSPD3O75425 235 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 FAM163BP0C2L3 166 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 HAPLN1P10915 354 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-208ENST00000598309 MYL4P12829 197 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 ATICP31939 592 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 TRPC3Q13507 836 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 MGAT5BQ3V5L5 792 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 DNAJB7Q7Z6W7 309 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-208ENST00000598309 PLEKHO2Q8TD55 490 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 TMC2Q8TDI7 906 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 ZNF516Q92618 1163 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 MCRS1Q96EZ8 462 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 PKMYT1Q99640 499 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 PRRX2Q99811 253 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 GPR88Q9GZN0 384 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 MFSD1Q9H3U5 465 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 ABI2Q9NYB9 513 aaPredicted RBP17.87■□□□□ 0.45
USHBP1-208ENST00000598309 HOOK1Q9UJC3 728 aaKnown RBP17.87■□□□□ 0.45
USHBP1-208ENST00000598309 FRMD4BQ9Y2L6 1034 aa17.87■□□□□ 0.45
USHBP1-208ENST00000598309 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 SOAT2O75908 522 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 CFHP08603 1231 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 ATF6P18850 670 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 WARSP23381 471 aaKnown RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 RPL13P26373 211 aaKnown RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 CASP4P49662 377 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 NUBP1P53384 320 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 PNOCQ13519 176 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 ZCWPW2Q504Y3 356 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 SHKBP1Q8TBC3 707 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 SYAP1Q96A49 352 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 ELSPBP1Q96BH3 223 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 GSDMAQ96QA5 445 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 KXD1Q9BQD3 176 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 RPP25Q9BUL9 199 aaKnown RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 GTPBP4Q9BZE4 634 aaKnown RBP17.86■□□□□ 0.45
USHBP1-208ENST00000598309 VRTNQ9H8Y1 702 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 TMLHEQ9NVH6 421 aa17.86■□□□□ 0.45
USHBP1-208ENST00000598309 TACC1O75410 805 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 SMC2O95347 1197 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 CST3P01034 146 aaPredicted RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 NR2F2P24468 414 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 ACAT1P24752 427 aaKnown RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 AVPR2P30518 371 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 CLCN5P51795 746 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 VCPP55072 806 aaKnown RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 TNNC1P63316 161 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 ENPEPQ07075 957 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 TEAD2Q15562 447 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 EDRF1Q3B7T1 1238 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 COBLL1Q53SF7 1204 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 FAM78AQ5JUQ0 283 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 TDRD10Q5VZ19 366 aaKnown RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 CEP135Q66GS9 1140 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 ASTLQ6HA08 431 aaPredicted RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 POTEHQ6S545 545 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 MUC6Q6W4X9 2439 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 ELOA2Q8IYF1 753 aaPredicted RBP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 SIX5Q8N196 739 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 FAM200AQ8TCP9 573 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 GPR152Q8TDT2 470 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 SMARCD2Q92925 531 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 FUBP3Q96I24 572 aaKnown RBP eCLIP17.85■□□□□ 0.45
USHBP1-208ENST00000598309 ASB16Q96NS5 453 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 LPIN3Q9BQK8 851 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 XYLT2Q9H1B5 865 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 CDH9Q9ULB4 789 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 MAPK8IP1Q9UQF2 711 aa17.85■□□□□ 0.45
USHBP1-208ENST00000598309 KMT2EQ8IZD2 1858 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 NRG2O14511 850 aaPredicted RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 IKBKBO14920 756 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 PHACTR2O75167 634 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 C4BPAP04003 597 aaKnown RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 FCARP24071 287 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 MYL6P60660 151 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 PFKPQ01813 784 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 BIRC3Q13489 604 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms