RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 DPH6Q7L8W6 267 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 HS2ST1Q7LGA3 356 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 TOP6BLQ8N6T0 577 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 DEPDC1BQ8WUY9 529 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 DNASE1L2Q92874 299 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 SLITRK6Q9H5Y7 841 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 BRD9Q9H8M2 597 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 SLC39A2Q9NP94 309 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 DLGAP2Q9P1A6 1054 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 USP25Q9UHP3 1055 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 L1RE1Q9UN81 338 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 PCDHB5Q9Y5E4 795 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 SNX9Q9Y5X1 595 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 NBL1P41271 181 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 LHX1P48742 406 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 KRT85P78386 507 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 MYL7Q01449 175 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 NFE2Q16621 373 aaPredicted RBP24.74■■□□□ 1.55
SSBP4-205ENST00000598159 BMT2Q1RMZ1 405 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 SCARA3Q6AZY7 606 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 VITQ6UXI7 678 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 WDR49Q8IV35 697 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 MFSD6LQ8IWD5 586 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 NELFCDQ8IXH7 590 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 XXYLT1Q8NBI6 393 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 RDH13Q8NBN7 331 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 IRF7Q92985 503 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 SPATA32Q96LK8 384 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 FOXQ1Q9C009 403 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 ATXN3LQ9H3M9 355 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 TRPV5Q9NQA5 729 aa24.74■■□□□ 1.55
SSBP4-205ENST00000598159 DDX43Q9NXZ2 648 aaKnown RBP24.74■■□□□ 1.55
SSBP4-205ENST00000598159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 CLIC2O15247 247 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 GRM2Q14416 872 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 TAF12Q16514 161 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 SNRNP35Q16560 246 aaKnown RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 KNOP1Q1ED39 458 aaKnown RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 ARHGAP15Q53QZ3 475 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 LMBRD2Q68DH5 695 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 GAREM2Q75VX8 874 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 OR5B17Q8NGF7 314 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 LEO1Q8WVC0 666 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 PAGE5Q96GU1 130 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 ZNF334Q9HCZ1 680 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 ABI2Q9NYB9 513 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-205ENST00000598159 ZDHHC9Q9Y397 364 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 ATP6V1DQ9Y5K8 247 aa24.73■■□□□ 1.55
SSBP4-205ENST00000598159 FAM170BA6NMN3 283 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 ACTN4O43707 911 aaKnown RBP24.72■■□□□ 1.55
SSBP4-205ENST00000598159 PRPF40AO75400 957 aaKnown RBP24.72■■□□□ 1.55
SSBP4-205ENST00000598159 ATF6P18850 670 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 GABRR2P28476 465 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 VIPR2P41587 438 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 PSMD2Q13200 908 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 ZNF852Q6ZMS4 543 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 C12orf56Q8IXR9 622 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 HPDLQ96IR7 371 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 FNBP1Q96RU3 617 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 LPIN3Q9BQK8 851 aa24.72■■□□□ 1.55
SSBP4-205ENST00000598159 MRPS17Q9Y2R5 130 aaKnown RBP24.72■■□□□ 1.55
SSBP4-205ENST00000598159 A0A1B0GVL5 298 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 HEPACAM2A8MVW5 462 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 GABRDO14764 452 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 ZNF263O14978 683 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 NCAM2O15394 837 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 MYL1P05976 194 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 TNNI1P19237 187 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 CDC25CP30307 473 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 GDI1P31150 447 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 CYP2J2P51589 502 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 UBXN2BQ14CS0 331 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 PSMD6Q15008 389 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 SOWAHAQ2M3V2 549 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 TPRG1Q6ZUI0 275 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 ARID3BQ8IVW6 561 aaPredicted RBP24.71■■□□□ 1.55
SSBP4-205ENST00000598159 C1orf210Q8IVY1 113 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 GRAMD1CQ8IYS0 662 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 FAM84AQ96KN4 292 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 BCO2Q9BYV7 579 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 LTB4R2Q9NPC1 389 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 HEBP1Q9NRV9 189 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 TMLHEQ9NVH6 421 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 MIA3Q5JRA6 1907 aa24.71■■□□□ 1.55
SSBP4-205ENST00000598159 PTPRJQ12913 1337 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 MAN2B1O00754 1011 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 KLRC4O43908 158 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 PFKFB1P16118 471 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 PCSK1P29120 753 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 WEE1P30291 646 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 MAGEA9P43362 315 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 CDR1P51861 262 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 CYP24A1Q07973 514 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 INTS6LQ5JSJ4 861 aaKnown RBP24.7■■□□□ 1.54
SSBP4-205ENST00000598159 GPR158Q5T848 1215 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 TRAPPC11Q7Z392 1133 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 LIMS2Q7Z4I7 341 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 ADGRF2Q8IZF7 708 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 GOLGA5Q8TBA6 731 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 GIPC2Q8TF65 315 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms