RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ZNF667Q5HYK9 610 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
ZNF558-204ENST00000596172 OSTM1Q86WC4 334 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 ATAD1Q8NBU5 361 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 PKMYT1Q99640 499 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 CUL9Q8IWT3 2517 aa19.55■□□□□ 0.72
ZNF558-204ENST00000596172 CLUHO75153 1309 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 FGFR1OPO95684 399 aaKnown RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 P4HA1P13674 534 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 SSTR3P32745 418 aaPredicted RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 GNL1P36915 607 aaPredicted RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 TUFMP49411 452 aaKnown RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 CT47A1Q5JQC4 288 aaPredicted RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 INTS6LQ5JSJ4 861 aaKnown RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 OTOP3Q7RTS5 596 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 PLCD3Q8N3E9 789 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 SPPL2BQ8TCT7 592 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 FAXDC2Q96IV6 333 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 PGLYRP2Q96PD5 576 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 AVENQ9NQS1 362 aaPredicted RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 NXF1Q9UBU9 619 aaKnown RBP19.54■□□□□ 0.72
ZNF558-204ENST00000596172 CDH9Q9ULB4 789 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 MUC3AQ02505 3323 aa19.54■□□□□ 0.72
ZNF558-204ENST00000596172 PMM2O15305 246 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 PIK3CAP42336 1068 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 MARSP56192 900 aaKnown RBP19.53■□□□□ 0.72
ZNF558-204ENST00000596172 STX17P56962 302 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 NLRP12P59046 1061 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 PLD1Q13393 1074 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 FAM171BQ6P995 826 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 GRASPQ7Z6J2 395 aaPredicted RBP19.53■□□□□ 0.72
ZNF558-204ENST00000596172 ZDHHC14Q8IZN3 488 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 TAS1R2Q8TE23 839 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 SLC35C1Q96A29 364 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 ACSF2Q96CM8 615 aaPredicted RBP19.53■□□□□ 0.72
ZNF558-204ENST00000596172 MRPL45Q9BRJ2 306 aaKnown RBP19.53■□□□□ 0.72
ZNF558-204ENST00000596172 CRISPLD1Q9H336 500 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 SNX25Q9H3E2 840 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 ABCB6Q9NP58 842 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 DNMT3BQ9UBC3 853 aaKnown RBP19.53■□□□□ 0.72
ZNF558-204ENST00000596172 COQ4Q9Y3A0 265 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 YIPF1Q9Y548 306 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 PCDHB5Q9Y5E4 795 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 TSC2P49815 1807 aa19.53■□□□□ 0.72
ZNF558-204ENST00000596172 PTPN2P17706 415 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 ACAT1P24752 427 aaKnown RBP19.52■□□□□ 0.72
ZNF558-204ENST00000596172 LMO2P25791 158 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 ERCC5P28715 1186 aaPredicted RBP19.52■□□□□ 0.72
ZNF558-204ENST00000596172 MXI1P50539 228 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 TWF1Q12792 350 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 MAPRE1Q15691 268 aaKnown RBP19.52■□□□□ 0.72
ZNF558-204ENST00000596172 ELMOD1Q8N336 334 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 FBXL13Q8NEE6 735 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 MED15Q96RN5 788 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
ZNF558-204ENST00000596172 IMPG2Q9BZV3 1241 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 TMLHEQ9NVH6 421 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 DACH1Q9UI36 760 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 SLC27A5Q9Y2P5 690 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 ASB3Q9Y575 518 aa19.52■□□□□ 0.72
ZNF558-204ENST00000596172 C2CD4DB7Z1M9 353 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 HAPLN1P10915 354 aaPredicted RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 FSHRP23945 695 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 ALDH1A3P47895 512 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 EPHB3P54753 998 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 CFAP221Q4G0U5 840 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 CCDC40Q4G0X9 1142 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 PABPC1LQ4VXU2 614 aaKnown RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 TCERG1LQ5VWI1 586 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 TDRD5Q8NAT2 981 aaKnown RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 LEMD2Q8NC56 503 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 CCDC150Q8NCX0 1101 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 OR6B3Q8NGW1 331 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 FUBP3Q96I24 572 aaKnown RBP eCLIP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 ZNF512Q96ME7 567 aaPredicted RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 SYT15Q9BQS2 421 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 RAB20Q9NX57 234 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 CEP72Q9P209 647 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 GTF3C4Q9UKN8 822 aa19.51■□□□□ 0.71
ZNF558-204ENST00000596172 ZFP37Q9Y6Q3 630 aaPredicted RBP19.51■□□□□ 0.71
ZNF558-204ENST00000596172 MYBPHLA2RUH7 354 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 MICAL2O94851 1124 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 PDGFRBP09619 1106 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 EPHA5P54756 1037 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 NOP14P78316 857 aaKnown RBP19.5■□□□□ 0.71
ZNF558-204ENST00000596172 DPCR1Q3MIW9 517 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 CBWD6Q4V339 395 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 CBWD3Q5JTY5 395 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 CBWD5Q5RIA9 395 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 IQCEQ6IPM2 695 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 RNF135Q8IUD6 432 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 SEMA4DQ92854 862 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 BCO2Q9BYV7 579 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 SMYD3Q9H7B4 428 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 MMRN2Q9H8L6 949 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms