RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DESI2Q9BSY9 194 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 SDCBP2Q9H190 292 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 SMYD3Q9H7B4 428 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 LUC7LQ9NQ29 371 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 GDAP2Q9NXN4 497 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 ADAMTS1Q9UHI8 967 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 PPP2R2CQ9Y2T4 447 aa13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 PDCD11Q14690 1871 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-209ENST00000595803 TBKBP1A7MCY6 615 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 CYB561D2O14569 222 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 SPTLC1O15269 473 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 ALDH2P05091 517 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 CDR2Q01850 454 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 UPP1Q16831 310 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 CCDC122Q5T0U0 273 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 C10orf76Q5T2E6 689 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 DPH6Q7L8W6 267 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 ZNF677Q86XU0 584 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 TXLNBQ8N3L3 684 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 APPL2Q8NEU8 664 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 OR6B3Q8NGW1 331 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 SNX25Q9H3E2 840 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 TBC1D13Q9NVG8 400 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 BARX2Q9UMQ3 279 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 PCDHA13Q9Y5I0 950 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 TANC1Q9C0D5 1861 aa13.92□□□□□ -0.18
SHKBP1-209ENST00000595803 A0A087X0T9 212 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 DDX3XO00571 662 aaKnown RBP eCLIP13.91□□□□□ -0.185e-8■■■■■ 77.1
SHKBP1-209ENST00000595803 THAP12O43422 761 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 DCXO43602 365 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 CILPO75339 1184 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 B3GAT3O94766 335 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 DDHD2O94830 711 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 ARHGEF15O94989 841 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 LCA5LO95447 670 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 PAEPP09466 180 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 FAM228BP0C875 321 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 GNA15P30679 374 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 GNL1P36915 607 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 OR1G1P47890 313 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 SOWAHAQ2M3V2 549 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 HFE2Q6ZVN8 426 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 ZNF280BQ86YH2 543 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 GLYCTKQ8IVS8 523 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 TOP6BLQ8N6T0 577 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 SLC20A1Q8WUM9 679 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 RABGGTAQ92696 567 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 VWCEQ96DN2 955 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 TMEM176AQ96HP8 235 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 SENP8Q96LD8 212 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 HEXIM2Q96MH2 286 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 MRPL45Q9BRJ2 306 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 ACP6Q9NPH0 428 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 NOCTQ9UK39 431 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 KIAA1257Q9ULG3 409 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 TET1Q8NFU7 2136 aa13.91□□□□□ -0.18
SHKBP1-209ENST00000595803 TRIOO75962 3097 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 ARHGEF37A1IGU5 675 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 A8MXQ7 604 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 MED7O43513 233 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 TACC1O75410 805 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 TADA2AO75478 443 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 BAIAP3O94812 1187 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 MMEP08473 750 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 VDRP11473 427 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 CD19P15391 556 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 CHRNB2P17787 502 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 GATMP50440 423 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 ZNF132P52740 706 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 NDST1P52848 882 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 RAD23BP54727 409 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 ALKBH5Q6P6C2 394 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 UNC93AQ86WB7 457 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 METTL23Q86XA0 190 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 CRIPAKQ8N1N5 446 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 LNX1Q8TBB1 728 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 PAAF1Q9BRP4 392 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 UBE2ZQ9H832 354 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 NAGPAQ9UK23 515 aa13.9□□□□□ -0.18
SHKBP1-209ENST00000595803 FAN1Q9Y2M0 1017 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms