RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 FBXO4Q9UKT5 387 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
CCDC9-202ENST00000595659 SLC38A8A6NNN8 435 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 ARNTLO00327 626 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 DPYSL4O14531 572 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 HCRTO43612 131 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 PRAMEF12O95522 483 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 HAPLN1P10915 354 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 MAGEA9P43362 315 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 RPS9P46781 194 aaKnown RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 KPNA1P52294 538 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 ALCAMQ13740 583 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 E2F4Q16254 413 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 CCDC142Q17RM4 750 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 ARHGAP15Q53QZ3 475 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 DCP1BQ8IZD4 617 aaKnown RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 DCLK2Q8N568 766 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
CCDC9-202ENST00000595659 E2F7Q96AV8 911 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 TRPV5Q9NQA5 729 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 HSFX1Q9UBD0 423 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 L1RE1Q9UN81 338 aa18.34■□□□□ 0.53
CCDC9-202ENST00000595659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.33■□□□□ 0.52
CCDC9-202ENST00000595659 KINO60870 393 aaKnown RBP18.33■□□□□ 0.52
CCDC9-202ENST00000595659 PPP6R2O75170 966 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 CASP1P29466 404 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 HOXD13P35453 343 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 PNPLA4P41247 253 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 ASIC1P78348 528 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 TSPY1Q01534 308 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 SHC4Q6S5L8 630 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 OSTM1Q86WC4 334 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 GPD1LQ8N335 351 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 CXorf38Q8TB03 319 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 SPPL2BQ8TCT7 592 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 ATRIPQ8WXE1 791 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 SLC46A2Q9BY10 475 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 TRIM9Q9C026 710 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 TNMDQ9H2S6 317 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 TASP1Q9H6P5 420 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 DDX43Q9NXZ2 648 aaKnown RBP18.33■□□□□ 0.52
CCDC9-202ENST00000595659 SIX4Q9UIU6 781 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 MAGED2Q9UNF1 606 aaPredicted RBP18.33■□□□□ 0.52
CCDC9-202ENST00000595659 PCDHB5Q9Y5E4 795 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 SNX9Q9Y5X1 595 aa18.33■□□□□ 0.52
CCDC9-202ENST00000595659 PTPRJQ12913 1337 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 CHADO15335 359 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 HUS1O60921 280 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
CCDC9-202ENST00000595659 FGF19O95750 216 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 TMEM191BP0C7N4 346 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 RBP5P82980 135 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 FCHO2Q0JRZ9 810 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 RDH13Q8NBN7 331 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 OR5B17Q8NGF7 314 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 C2orf15Q8WU43 125 aaKnown RBP18.32■□□□□ 0.52
CCDC9-202ENST00000595659 GCNAQ96QF7 691 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 RBM12Q9NTZ6 932 aaKnown RBP18.32■□□□□ 0.52
CCDC9-202ENST00000595659 KBTBD4Q9NVX7 518 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
CCDC9-202ENST00000595659 CUTAO60888 179 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 CHRNB1P11230 501 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 CYP2F1P24903 491 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 CDC25CP30307 473 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 TNK2Q07912 1038 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 DDR2Q16832 855 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 ZNF528Q3MIS6 628 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 TXNDC11Q6PKC3 985 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 LRRC52Q8N7C0 313 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 SUMF1Q8NBK3 374 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 SNX21Q969T3 373 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 BLZF1Q9H2G9 400 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 CHRDQ9H2X0 955 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 INTS13Q9NVM9 706 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 ZSCAN32Q9NX65 697 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 HSPBP1Q9NZL4 362 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 GTF3C4Q9UKN8 822 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 ITGA11Q9UKX5 1188 aa18.31■□□□□ 0.52
CCDC9-202ENST00000595659 PTPRZ1P23471 2315 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-202ENST00000595659 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
CCDC9-202ENST00000595659 YEATS4O95619 227 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 HSP90AA1P07900 732 aaKnown RBP18.3■□□□□ 0.52
CCDC9-202ENST00000595659 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
CCDC9-202ENST00000595659 NLRP12P59046 1061 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 AMPD3Q01432 767 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 MYL7Q01449 175 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 SMARCB1Q12824 385 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 NFE2Q16621 373 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-202ENST00000595659 STXBP4Q6ZWJ1 553 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 TMEM150AQ86TG1 271 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 NELFCDQ8IXH7 590 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 MAB21L3Q8N8X9 362 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms