RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 JRKLQ9Y4A0 524 aa16.14■□□□□ 0.17
VRK3-207ENST00000594092 DDHD2O94830 711 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 LSM8O95777 96 aaKnown RBP16.13■□□□□ 0.17
VRK3-207ENST00000594092 TIMP1P01033 207 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 WARSP23381 471 aaKnown RBP16.13■□□□□ 0.17
VRK3-207ENST00000594092 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
VRK3-207ENST00000594092 NSFP46459 744 aaKnown RBP16.13■□□□□ 0.17
VRK3-207ENST00000594092 GPC5P78333 572 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 SGO2Q562F6 1265 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 CNKSR3Q6P9H4 555 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 CD300LGQ6UXG3 332 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 OSTM1Q86WC4 334 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 MCOLN2Q8IZK6 566 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 SNX25Q9H3E2 840 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 CDC23Q9UJX2 597 aa16.13■□□□□ 0.17
VRK3-207ENST00000594092 A8MXQ7 604 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 ENC1O14682 589 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 HCRTO43612 131 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 B3GAT3O94766 335 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 ATP1A1P05023 1023 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 FAM163BP0C2L3 166 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 LMO2P25791 158 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 CDH5P33151 784 aaPredicted RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 GATMP50440 423 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 CNGA2Q16280 664 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 WSCD1Q658N2 575 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 DENND1BQ6P3S1 775 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 ACOT1Q86TX2 421 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 TMEM35BQ8NCS4 154 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 MNS1Q8NEH6 495 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 ZNF653Q96CK0 615 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 CASD1Q96PB1 797 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 DPEP3Q9H4B8 488 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 GTF3C4Q9UKN8 822 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.12■□□□□ 0.17
VRK3-207ENST00000594092 MYH10P35580 1976 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 MICAL3Q7RTP6 2002 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 O00370 1275 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 CYP1A2P05177 515 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 IKBKEQ14164 716 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 PAN2Q504Q3 1202 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 TIGD5Q53EQ6 642 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 PAPD7Q5XG87 772 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 DCLRE1AQ6PJP8 1040 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 DSTYKQ6XUX3 929 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 MON1BQ7L1V2 547 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 PHF13Q86YI8 300 aaPredicted RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 NPAS4Q8IUM7 802 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 COLGALT2Q8IYK4 626 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 WDTC1Q8N5D0 677 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 C12orf29Q8N999 325 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 C1orf131Q8NDD1 294 aaKnown RBP16.12■□□□□ 0.17
VRK3-207ENST00000594092 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 LHX5Q9H2C1 402 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 OSGEPQ9NPF4 335 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 PCDHGC5Q9Y5F6 944 aa16.12■□□□□ 0.17
VRK3-207ENST00000594092 GRID2IPA4D2P6 1211 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 GABRDO14764 452 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 HOXA2O43364 376 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 PALMO75781 387 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 MICAL2O94851 1124 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 RAG1P15918 1043 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 AMPD2Q01433 879 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 RNASELQ05823 741 aaKnown RBP16.11■□□□□ 0.17
VRK3-207ENST00000594092 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 PPP1R2P3Q6NXS1 205 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
VRK3-207ENST00000594092 RHOT2Q8IXI1 618 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 CRYBG2Q8N1P7 616 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 TMEM86AQ8N2M4 240 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 CHORDC1Q9UHD1 332 aaPredicted RBP16.11■□□□□ 0.17
VRK3-207ENST00000594092 COG5Q9UP83 839 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 CEP83Q9Y592 693 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
VRK3-207ENST00000594092 F8W810 466 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 I3L4J1 428 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 DYNC1I1O14576 645 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 KIF4AO95239 1232 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 ITGB1P05556 798 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 CSF2RAP15509 400 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 PAX3P23760 479 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 BRCC3P46736 316 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 PTP4A2Q12974 167 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 STILQ15468 1287 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 PPP1R26Q5T8A7 1209 aaPredicted RBP16.1■□□□□ 0.17
VRK3-207ENST00000594092 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 HASPINQ8TF76 798 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 TRIM11Q96F44 468 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 VCPIP1Q96JH7 1222 aa16.1■□□□□ 0.17
VRK3-207ENST00000594092 FAM193BQ96PV7 902 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms