RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GRIK3Q13003 919 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 CLEC16AQ2KHT3 1053 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 SOWAHAQ2M3V2 549 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 CLLU1OSQ5K130 101 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 PASD1Q8IV76 773 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 COG1Q8WTW3 980 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 RPGRIP1Q96KN7 1286 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 OSBPL9Q96SU4 736 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 MRPL45Q9BRJ2 306 aaKnown RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 PAAF1Q9BRP4 392 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 THAP2Q9H0W7 228 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 ABCB6Q9NP58 842 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 TMEM39AQ9NV64 488 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 HYOU1Q9Y4L1 999 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 BTNL10A8MVZ5 291 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 PODXLO00592 558 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 ENPP3O14638 875 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 INPPL1O15357 1258 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 PARNO95453 639 aaKnown RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 CYP1A1P04798 512 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 PAEPP09466 180 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 CLTBP09497 229 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 TMEM253P0C7T8 217 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 FGFR1P11362 822 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 UNGP13051 313 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 CXCR5P32302 372 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 FNDC1Q4ZHG4 1894 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 NECAB2Q7Z6G3 386 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 DEFB128Q7Z7B8 93 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 TTC39CQ8N584 583 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 RNF10Q8N5U6 811 aaKnown RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 HNRNPLLQ8WVV9 542 aaKnown RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 TMEM176AQ96HP8 235 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 PALMO75781 387 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 CD19P15391 556 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 UPP1Q16831 310 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 BEND6Q5SZJ8 279 aaPredicted RBP14.04□□□□□ -0.16
VRK3-205ENST00000593919 GLB1LQ6UWU2 654 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 CREG2Q8IUH2 290 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 C3orf58Q8NDZ4 430 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 CPA5Q8WXQ8 436 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 ARHGEF26Q96DR7 871 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 NME7Q9Y5B8 376 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 TSC2P49815 1807 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 ALPK3Q96L96 1907 aa14.04□□□□□ -0.16
VRK3-205ENST00000593919 TCP1P17987 556 aaKnown RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 NOMO3P69849 1222 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 CENPCQ03188 943 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 NAA35Q5VZE5 725 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 ACAD10Q6JQN1 1059 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 TRIM72Q6ZMU5 477 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 LIMS2Q7Z4I7 341 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 RFFLQ8WZ73 363 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 NT5C1AQ9BXI3 368 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 MCOLN1Q9GZU1 580 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 SMARCAL1Q9NZC9 954 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 EHD2Q9NZN4 543 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 L1RE1Q9UN81 338 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 NCANO14594 1321 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 A0A0A6YYK5 440 aaPredicted RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 ATMINO43313 823 aaPredicted RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 FTCDO95954 541 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 PRLRP16471 622 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 RPL9P32969 192 aaKnown RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 DNA2P51530 1060 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 TUSC3Q13454 348 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 OR6B3Q8NGW1 331 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 HEXIM2Q96MH2 286 aaKnown RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 TLR10Q9BXR5 811 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 ELAC1Q9H777 363 aaKnown RBP14.03□□□□□ -0.16
VRK3-205ENST00000593919 OSGEPQ9NPF4 335 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 PCDHGC3Q9UN70 934 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 LTBP2Q14767 1821 aa14.03□□□□□ -0.16
VRK3-205ENST00000593919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.02□□□□□ -0.16
VRK3-205ENST00000593919 HCRTO43612 131 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 HUS1O60921 280 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.16
VRK3-205ENST00000593919 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.16
VRK3-205ENST00000593919 NOMO2Q5JPE7 1267 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 WDR93Q6P2C0 686 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.16
VRK3-205ENST00000593919 ADGRF2Q8IZF7 708 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 TOP6BLQ8N6T0 577 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.16
VRK3-205ENST00000593919 CYB561D2O14569 222 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 MED7O43513 233 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 B4GALT3O60512 393 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 B3GAT3O94766 335 aa14.02□□□□□ -0.17
VRK3-205ENST00000593919 TUBBP07437 444 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms