RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ZNF720Q7Z2F6 126 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CD302Q8IX05 232 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 TSPAN18Q96SJ8 248 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 PKMYT1Q99640 499 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 PYM1Q9BRP8 204 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 IER2Q9BTL4 223 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 FAM126AQ9BYI3 521 aaPredicted RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 ASB7Q9H672 318 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 HPS4Q9NQG7 708 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 POLR3BQ9NW08 1133 aaPredicted RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 DPP3Q9NY33 737 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 HSFX1Q9UBD0 423 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 AGO2Q9UKV8 859 aaKnown RBP11.53□□□□□ -0.56
USE1-203ENST00000593597 SMC3Q9UQE7 1217 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CCL26Q9Y258 94 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 ASB3Q9Y575 518 aa11.53□□□□□ -0.56
USE1-203ENST00000593597 CACNA1BQ00975 2339 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
USE1-203ENST00000593597 F11P03951 625 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 WEE1P30291 646 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 DDIT3P35638 169 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 CXCL12P48061 93 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 TAF6P49848 677 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 SPEM2Q0P670 501 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 RESTQ13127 1097 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 CUL4AQ13619 759 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 MGAT5BQ3V5L5 792 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 SDHAF4Q5VUM1 108 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 OSTM1Q86WC4 334 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 C1orf127Q8N9H9 656 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 CSGALNACT1Q8TDX6 532 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 SAAL1Q96ER3 474 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 CLIC6Q96NY7 704 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 TASP1Q9H6P5 420 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 OBP2AQ9NY56 170 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
USE1-203ENST00000593597 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.52□□□□□ -0.57
USE1-203ENST00000593597 ZFHX4Q86UP3 3567 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 PTPRJQ12913 1337 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 FRYQ5TBA9 3013 aa11.52□□□□□ -0.57
USE1-203ENST00000593597 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 SCP2P22307 547 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 ARHGAP29Q52LW3 1261 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 TRIM68Q6AZZ1 485 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 RALGPS2Q86X27 583 aaPredicted RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 YAF2Q8IY57 180 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 GLIS3Q8NEA6 775 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 BPIFB1Q8TDL5 484 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 MSANTD3Q96H12 275 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 FAM83CQ9BQN1 747 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 C8orf33Q9H7E9 229 aaPredicted RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 SIX4Q9UIU6 781 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 USP18Q9UMW8 372 aa11.51□□□□□ -0.57
USE1-203ENST00000593597 CNOT1A5YKK6 2376 aaKnown RBP11.51□□□□□ -0.57
USE1-203ENST00000593597 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 EXTL3O43909 919 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 GDF9O60383 454 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 BMP15O95972 392 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 ARSAP15289 507 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 ACAT1P24752 427 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 POLR2BP30876 1174 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 MCM2P49736 904 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 NLRP12P59046 1061 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 HEATR6Q6AI08 1181 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 FSTL4Q6MZW2 842 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 ITIH5Q86UX2 942 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 BRSK2Q8IWQ3 736 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 CMTM8Q8IZV2 173 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 PDCL2Q8N4E4 241 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 CELF5Q8N6W0 485 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 POMGNT1Q8WZA1 660 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 HVCN1Q96D96 273 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 CBWD1Q9BRT8 395 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 PI4K2AQ9BTU6 479 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 FBRSL1Q9HCM7 1045 aaKnown RBP11.5□□□□□ -0.57
USE1-203ENST00000593597 DSEQ9UL01 958 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 NUP205Q92621 2012 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 MYOFQ9NZM1 2061 aa11.5□□□□□ -0.57
USE1-203ENST00000593597 TNRC6BQ9UPQ9 1833 aaKnown RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 VPS37CA5D8V6 355 aaPredicted RBP11.49□□□□□ -0.57
USE1-203ENST00000593597 GOLGA8IPA6NC78 632 aa11.49□□□□□ -0.57
USE1-203ENST00000593597 ANTXRLA6NF34 631 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms