RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 GPD1LQ8N335 351 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 GLIS3Q8NEA6 775 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 SPPL2BQ8TCT7 592 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 FAM3CQ92520 227 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 DHX58Q96C10 678 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 MKNK1Q9BUB5 465 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 CUEDC2Q9H467 287 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 KBTBD4Q9NVX7 518 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 FBXO4Q9UKT5 387 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
CIRBP-240ENST00000592815 SCN1AP35498 2009 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-240ENST00000592815 F5P12259 2224 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 DPYSL4O14531 572 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 HUS1O60921 280 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 KRT19P08727 400 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 RBP5P82980 135 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 TSPY1Q01534 308 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 ZNF528Q3MIS6 628 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 SHC4Q6S5L8 630 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 ZNF687Q8N1G0 1237 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 PDCL2Q8N4E4 241 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 IQUBQ8NA54 791 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 CSGALNACT1Q8TDX6 532 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 LRRC3BQ96PB8 259 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 TRIM9Q9C026 710 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 TMLHEQ9NVH6 421 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 ITGA11Q9UKX5 1188 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 L1RE1Q9UN81 338 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
CIRBP-240ENST00000592815 CHADO15335 359 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 YEATS4O95619 227 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 HSP90AA1P07900 732 aaKnown RBP17.3■□□□□ 0.36
CIRBP-240ENST00000592815 CCNE1P24864 410 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 HOXD13P35453 343 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 ASIC1P78348 528 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 CYP4F8P98187 520 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 FCHO2Q0JRZ9 810 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 MTAPQ13126 283 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 LMBRD2Q68DH5 695 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-240ENST00000592815 LRRC52Q8N7C0 313 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 GCNAQ96QF7 691 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 MTMR12Q9C0I1 747 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 IL21Q9HBE4 155 aa17.3■□□□□ 0.36
CIRBP-240ENST00000592815 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ZNF233A6NK53 670 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ARNTLO00327 626 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 KIAA0391O15091 583 aaKnown RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ZSCAN22P10073 491 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 CDC25CP30307 473 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 KPNA1P52294 538 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 NFE2Q16621 373 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 TSSK4Q6SA08 328 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 CBWD2Q8IUF1 395 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 TTC8Q8TAM2 541 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ANKRD36BP1Q96IX9 119 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ACBD6Q9BR61 282 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 SLC46A2Q9BY10 475 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 INTS13Q9NVM9 706 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 GDAP2Q9NXN4 497 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 DDX43Q9NXZ2 648 aaKnown RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 SIX4Q9UIU6 781 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 R3HCC1Q9Y3T6 440 aaKnown RBP17.29■□□□□ 0.36
CIRBP-240ENST00000592815 SNX9Q9Y5X1 595 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 ANK1P16157 1881 aa17.29■□□□□ 0.36
CIRBP-240ENST00000592815 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 GPR15P49685 360 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 MLLT6P55198 1093 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 MYL7Q01449 175 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 SURF1Q15526 300 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 TMEM86AQ8N2M4 240 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 ZNF507Q8TCN5 953 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 ZFYVE19Q96K21 471 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 SMG9Q9H0W8 520 aaKnown RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 C8orf33Q9H7E9 229 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-240ENST00000592815 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
CIRBP-240ENST00000592815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-240ENST00000592815 SLC38A8A6NNN8 435 aa17.27■□□□□ 0.36
CIRBP-240ENST00000592815 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
CIRBP-240ENST00000592815 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
CIRBP-240ENST00000592815 F13A1P00488 732 aa17.27■□□□□ 0.36
CIRBP-240ENST00000592815 TNNC2P02585 160 aa17.27■□□□□ 0.36
CIRBP-240ENST00000592815 HMGA1P17096 107 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms