RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 KRT10P13645 584 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 SLC8A3P57103 927 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ATP13A4Q4VNC1 1196 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 SNRNP48Q6IEG0 339 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ZPBP2Q6X784 338 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 PCGF5Q86SE9 256 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 DEPTORQ8TB45 409 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 STAMBPL1Q96FJ0 436 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ZBTB45Q96K62 511 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 TMEM237Q96Q45 408 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 NOP53Q9NZM5 478 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 EDF1O60869 148 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 EDN1P05305 212 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 KCNA3P22001 575 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 EIF4BP23588 611 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 RFC5P40937 340 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 OGDHQ02218 1023 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 GPS1Q13098 491 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 CENPUQ71F23 418 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 GPATCH11Q8N954 259 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 RAB3IPQ96QF0 476 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 CYLDQ9NQC7 956 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 PSMC3IPQ9P2W1 217 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 PHTF1Q9UMS5 762 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 PI4K2BG5E9Z4 385 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 FASTKD3Q14CZ7 662 aaKnown RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ACCSLQ4AC99 568 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 DNAJC24Q6P3W2 148 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 INPP5DQ92835 1189 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 SMC6Q96SB8 1091 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ZNF302Q9NR11 478 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 FBXO40Q9UH90 709 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ZNF112Q9UJU3 913 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 GRID1Q9ULK0 1009 aa12.24□□□□□ -0.45
ZNF540-210ENST00000592533 ZMYND8Q9ULU4 1186 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-210ENST00000592533 E7ESA3 106 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ZSCAN5DPP0CG00 497 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 TSHRP16473 764 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 CBLBQ13191 982 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 TARBP2Q15633 366 aaKnown RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 PKN2Q16513 984 aaKnown RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ZNF398Q8TD17 642 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 MCEEQ96PE7 176 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 F8VP50 259 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 SMAPO00193 183 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 TRAFD1O14545 582 aaPredicted RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 DCTN3O75935 186 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ANP32DO95626 131 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ATF7P17544 494 aaPredicted RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 GJC1P36383 396 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 SSR1P43307 286 aaKnown RBP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 SP2Q02086 613 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 CRYMQ14894 314 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 AGGF1Q8N302 714 aaeCLIP12.23□□□□□ -0.45
ZNF540-210ENST00000592533 FNIP1Q8TF40 1166 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 C10orf82Q8WW14 230 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 ACAD9Q9H845 621 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 CHKBQ9Y259 395 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 SNCAIPQ9Y6H5 919 aa12.23□□□□□ -0.45
ZNF540-210ENST00000592533 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ADCY3O60266 1144 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ZWINTO95229 277 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 LACTBP83111 547 aaPredicted RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 KAZNQ674X7 775 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 KIF2BQ8N4N8 673 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 WDTC1Q8N5D0 677 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 UTP4Q969X6 686 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 PPME1Q9Y570 386 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 CLUHO75153 1309 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 PTPRFP10586 1907 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ZSWIM8A7E2V4 1837 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ETS1P14921 441 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 GEMIN4P57678 1058 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 GPX6P59796 221 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SLC25A11Q02978 314 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms