RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 HCRTO43612 131 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 CST3P01034 146 aaPredicted RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 RPN1P04843 607 aaKnown RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 HAPLN1P10915 354 aaPredicted RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 MYL4P12829 197 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 NUBP1P53384 320 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 EPHB3P54753 998 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 KRBA2Q6ZNG9 492 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 DNAJB7Q7Z6W7 309 aaPredicted RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 TMEM86AQ8N2M4 240 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 TOP6BLQ8N6T0 577 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 FLCNQ8NFG4 579 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 C2orf15Q8WU43 125 aaKnown RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 KBTBD7Q8WVZ9 684 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 ELSPBP1Q96BH3 223 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 ASB16Q96NS5 453 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 PRRX2Q99811 253 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 ACBD6Q9BR61 282 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 MKNK1Q9BUB5 465 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 MFSD1Q9H3U5 465 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 ASB3Q9Y575 518 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 SNX9Q9Y5X1 595 aa21.69■■□□□ 1.06
CIRBP-239ENST00000592467 NUP210Q8TEM1 1887 aaPredicted RBP21.69■■□□□ 1.06
CIRBP-239ENST00000592467 RHOBTB3O94955 611 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 TNNC2P02585 160 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 ALDH1A3P47895 512 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 SMARCB1Q12824 385 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 TEAD2Q15562 447 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 CCDC142Q17RM4 750 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 GAREM2Q75VX8 874 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 SLC9A9Q8IVB4 645 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 SPATA18Q8TC71 538 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 SPPL2BQ8TCT7 592 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 HPDLQ96IR7 371 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 LPIN3Q9BQK8 851 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 IL21Q9HBE4 155 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 DDX43Q9NXZ2 648 aaKnown RBP21.68■■□□□ 1.06
CIRBP-239ENST00000592467 PTPRDP23468 1912 aa21.68■■□□□ 1.06
CIRBP-239ENST00000592467 GALR2O43603 387 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 HUS1O60921 280 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 ZNF202O95125 648 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 DLATP10515 647 aaKnown RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 ACAT1P24752 427 aaKnown RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 HOXD11P31277 338 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 TUFMP49411 452 aaKnown RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 CLDN10P78369 228 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 INTS6LQ5JSJ4 861 aaKnown RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 DPH6Q7L8W6 267 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 DCP1BQ8IZD4 617 aaKnown RBP21.67■■□□□ 1.06
CIRBP-239ENST00000592467 CCDC127Q96BQ5 260 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 TRPV4Q9HBA0 871 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 ARHGEF3Q9NR81 526 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 NME7Q9Y5B8 376 aa21.67■■□□□ 1.06
CIRBP-239ENST00000592467 A0A1W2PRU2 124 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 CASP4P49662 377 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 PTPN5P54829 565 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 STARD6P59095 220 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 MGAT5BQ3V5L5 792 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 STXBP5Q5T5C0 1151 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 PHLDB3Q6NSJ2 640 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 ADGRF2Q8IZF7 708 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 GOLGA5Q8TBA6 731 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 SEPT5Q99719 369 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-239ENST00000592467 TBC1D17Q9HA65 648 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 ABI2Q9NYB9 513 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-239ENST00000592467 GREB1Q4ZG55 1949 aa21.66■■□□□ 1.06
CIRBP-239ENST00000592467 CACNA1HO95180 2353 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 SHISA7A6NL88 538 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 PDXKO00764 312 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 EXOC3O60645 756 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 PRPF40AO75400 957 aaKnown RBP21.65■■□□□ 1.06
CIRBP-239ENST00000592467 TNNI1P19237 187 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 NUCB2P80303 420 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 MYO1EQ12965 1108 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 FAM171BQ6P995 826 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 VITQ6UXI7 678 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 FMR1NBQ8N0W7 255 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-239ENST00000592467 PARD3BQ8TEW8 1205 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 SMARCD2Q92925 531 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 RSPRY1Q96DX4 576 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 PHOX2BQ99453 314 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 DDX23Q9BUQ8 820 aaKnown RBP21.65■■□□□ 1.06
CIRBP-239ENST00000592467 XYLT2Q9H1B5 865 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 DLGAP2Q9P1A6 1054 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 GTF3C4Q9UKN8 822 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 PCDHB5Q9Y5E4 795 aa21.65■■□□□ 1.06
CIRBP-239ENST00000592467 LRRIQ3A6PVS8 624 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-239ENST00000592467 STAU1O95793 577 aaKnown RBP21.64■■□□□ 1.05
CIRBP-239ENST00000592467 HMGA1P17096 107 aaKnown RBP21.64■■□□□ 1.05
CIRBP-239ENST00000592467 LMO2P25791 158 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 VIPR2P41587 438 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 LHX1P48742 406 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 GPR15P49685 360 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 MYL7Q01449 175 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 TSPY1Q01534 308 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 KCNB1Q14721 858 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 TMEM150AQ86TG1 271 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 ENGASEQ8NFI3 743 aa21.64■■□□□ 1.05
CIRBP-239ENST00000592467 ZSCAN18Q8TBC5 510 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-239ENST00000592467 GIPC2Q8TF65 315 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms