RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PEX2P28328 305 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 GNALP38405 381 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 GDF5P43026 501 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 SLC11A2P49281 568 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 UCP3P55916 312 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 TAP2Q03519 686 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 CTBP1Q13363 440 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 SEMA5AQ13591 1074 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 ABHD17BQ5VST6 288 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 SP5Q6BEB4 398 aaPredicted RBP4.28□□□□□ -1.72
VMP1-212ENST00000591782 ZNF783Q6ZMS7 281 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 Q6ZPA2 131 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 MICALCLQ6ZW33 695 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 USP51Q70EK9 711 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 ULK2Q8IYT8 1036 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 LCORLQ8N3X6 602 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 OR6B3Q8NGW1 331 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 SSH3Q8TE77 659 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 TTC17Q96AE7 1141 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 PTCD3Q96EY7 689 aaKnown RBP4.28□□□□□ -1.72
VMP1-212ENST00000591782 SLC46A1Q96NT5 459 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 DPH1Q9BZG8 443 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 TTYH3Q9C0H2 523 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 SMURF2Q9HAU4 748 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 DDX21Q9NR30 783 aaKnown RBP eCLIP4.28□□□□□ -1.72
VMP1-212ENST00000591782 TBCCD1Q9NVR7 557 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 CPNE7Q9UBL6 633 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 ING1Q9UK53 422 aaPredicted RBP4.28□□□□□ -1.72
VMP1-212ENST00000591782 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 RAD54BQ9Y620 910 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 COL4A3Q01955 1670 aa4.28□□□□□ -1.72
VMP1-212ENST00000591782 GRID2IPA4D2P6 1211 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 DCLK1O15075 740 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 MGEA5O60502 916 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 THP07101 528 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 MYF5P13349 255 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 KRT4P19013 534 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 NPTX2P47972 431 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 GCLCP48506 637 aaPredicted RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 NDUFV1P49821 464 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 SUMO3P55854 103 aaPredicted RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 TBX4P57082 545 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 SLC13A2Q13183 592 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 HLXQ14774 488 aaPredicted RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 POLD3Q15054 466 aaPredicted RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 SF3B3Q15393 1217 aaKnown RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 LONRF3Q496Y0 759 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 AMOTQ4VCS5 1084 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 LMBRD2Q68DH5 695 aaPredicted RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 Q6YL49 198 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 SLC15A4Q8N697 577 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 SLC16A11Q8NCK7 471 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 BEND2Q8NDZ0 799 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 MAML1Q92585 1016 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 Q96MF0 132 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 HEPHQ9BQS7 1158 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 SPATA5L1Q9BVQ7 753 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 APOL5Q9BWW9 433 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 LRRC27Q9C0I9 530 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 CYP4F11Q9HBI6 524 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 CASS4Q9NQ75 786 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 INTS13Q9NVM9 706 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 GEMIN8Q9NWZ8 242 aaKnown RBP4.27□□□□□ -1.73
VMP1-212ENST00000591782 STK32BQ9NY57 414 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 XPR1Q9UBH6 696 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 TMX2Q9Y320 296 aa4.27□□□□□ -1.73
VMP1-212ENST00000591782 DCAF1Q9Y4B6 1507 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 A0A087WWL8 130 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 ISM1B1AKI9 464 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 TMEM233B4DJY2 109 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 F5H697 171 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 MYO1CO00159 1063 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 PRC1O43663 620 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 TBC1D4O60343 1298 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 MAP4K4O95819 1239 aaPredicted RBP4.26□□□□□ -1.73
VMP1-212ENST00000591782 PPP3CBP16298 524 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 ITGALP20701 1170 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 DEKP35659 375 aaKnown RBP4.26□□□□□ -1.73
VMP1-212ENST00000591782 ZNF134P52741 427 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 LILRA4P59901 499 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 FHL2Q14192 279 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 CNGA2Q16280 664 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 COBLL1Q53SF7 1204 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 TMEM108Q6UXF1 575 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 TSHZ1Q6ZSZ6 1077 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 CCAR1Q8IX12 1150 aaKnown RBP4.26□□□□□ -1.73
VMP1-212ENST00000591782 MPP5Q8N3R9 675 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 LNX2Q8N448 690 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SLC44A3Q8N4M1 653 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 DNAJC5GQ8N7S2 189 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SLC30A5Q8TAD4 765 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 LPIN2Q92539 896 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 APIPQ96GX9 242 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SUCLG2Q96I99 432 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SARGQ9BW04 601 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 PCED1AQ9H1Q7 454 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms